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abi1a abl-interactor 1a [ Takifugu rubripes (torafugu) ]

Gene ID: 101074862, updated on 8-Mar-2024

Summary

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Gene symbol
abi1a
Gene description
abl-interactor 1a
See related
Ensembl:ENSTRUG00000010587
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Also known as
abi1
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 10
Exon count:
12
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 10 NC_042294.1 (9495121..9515964)
101 previous assembly FUGU5 (GCF_000180615.1) 10 NC_018899.1 (7141883..7162830)

Chromosome 10 - NC_042294.1Genomic Context describing neighboring genes Neighboring gene microtubule associated serine/threonine kinase-like Neighboring gene acyl-CoA binding domain containing 5a Neighboring gene uncharacterized LOC115251232 Neighboring gene protein adenylyltransferase SelO-like Neighboring gene prenyl (decaprenyl) diphosphate synthase, subunit 1 Neighboring gene amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SH3 domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lamellipodium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
abl interactor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042294.1 Reference fTakRub1.2 Primary Assembly

    Range
    9495121..9515964
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011608100.2 → XP_011606402.2  abl interactor 1 isoform X1

    UniProtKB/TrEMBL
    H2TPW8, H2TPW9
    Related
    ENSTRUP00000026726.3, ENSTRUT00000026834.3

  2. XM_011608103.2 → XP_011606405.2  abl interactor 1 isoform X4

    UniProtKB/TrEMBL
    A0A674N5J7, H2TPW7
    Related
    ENSTRUP00000068837.1, ENSTRUT00000076301.1

  3. XM_011608102.2 → XP_011606404.2  abl interactor 1 isoform X3

    UniProtKB/TrEMBL
    H2TPW8

  4. XM_011608101.2 → XP_011606403.2  abl interactor 1 isoform X2

    UniProtKB/TrEMBL
    A0A3B5K092, H2TPW8
    Related
    ENSTRUP00000050871.2, ENSTRUT00000055597.2

  5. XM_003968135.3 → XP_003968184.2  abl interactor 1 isoform X5

    UniProtKB/TrEMBL
    H2TPW8

  6. XM_011608105.2 → XP_011606407.2  abl interactor 1 isoform X8

    UniProtKB/TrEMBL
    H2TPW8

  7. XM_011608108.2 → XP_011606410.1  abl interactor 1 isoform X10

    UniProtKB/TrEMBL
    A0A674PN20
    Related
    ENSTRUP00000082243.1, ENSTRUT00000084438.1
    Conserved Domains (2) summary
    pfam07815
    Location:93 → 170
    Abi_HHR; Abl-interactor HHR
    cl17036
    Location:340 → 398
    SH3; Src Homology 3 domain superfamily

  8. XM_029842800.1 → XP_029698660.1  abl interactor 1 isoform X6

    UniProtKB/TrEMBL
    H2TPW8
    Related
    ENSTRUP00000026725.3, ENSTRUT00000026833.3

  9. XM_011608104.2 → XP_011606406.2  abl interactor 1 isoform X7

    UniProtKB/TrEMBL
    H2TPW8

  10. XM_011608106.2 → XP_011606408.2  abl interactor 1 isoform X9

    UniProtKB/TrEMBL
    H2TPW8

  11. XM_029842801.1 → XP_029698661.1  abl interactor 1 isoform X11

    UniProtKB/TrEMBL
    A0A674PN20
    Related
    ENSTRUP00000087053.1, ENSTRUT00000069614.1
Nucleotide Protein
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