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dcun1d4 DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) [ Takifugu rubripes (torafugu) ]

Gene ID: 101072414, updated on 8-Mar-2024

Summary

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Gene symbol
dcun1d4
Gene description
DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)
See related
Ensembl:ENSTRUG00000014849
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 20
Exon count:
15
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 20 NC_042304.1 (4620903..4628590)
101 previous assembly FUGU5 (GCF_000180615.1) 20 NC_018909.1 (2579497..2584526)

Chromosome 20 - NC_042304.1Genomic Context describing neighboring genes Neighboring gene furry homolog, like Neighboring gene OCIA domain containing 2 Neighboring gene dentin sialophosphoprotein-like Neighboring gene uncharacterized LOC115247173 Neighboring gene spermatogenesis associated 18

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cullin family protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin conjugating enzyme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin-like protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein neddylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DCN1-like protein 4
Names
defective in cullin neddylation 1 domain containing 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042304.1 Reference fTakRub1.2 Primary Assembly

    Range
    4620903..4628590
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029827864.1 → XP_029683724.1  DCN1-like protein 4 isoform X4

    UniProtKB/TrEMBL
    H2ULW0
    Conserved Domains (1) summary
    pfam03556
    Location:118 → 227
    Cullin_binding; Cullin binding

  2. XM_011614536.2 → XP_011612838.1  DCN1-like protein 4 isoform X1

    UniProtKB/TrEMBL
    H2ULW0
    Conserved Domains (1) summary
    pfam03556
    Location:167 → 276
    Cullin_binding; Cullin binding

  3. XM_029827863.1 → XP_029683723.1  DCN1-like protein 4 isoform X2

    UniProtKB/TrEMBL
    H2ULW0

  4. XM_003973927.3 → XP_003973976.2  DCN1-like protein 4 isoform X3

    UniProtKB/TrEMBL
    A0A3B5KF43, H2ULW0
    Related
    ENSTRUP00000054658.1, ENSTRUT00000051171.2
    Conserved Domains (1) summary
    pfam03556
    Location:163 → 272
    Cullin_binding; Cullin binding

  5. XM_011614538.2 → XP_011612840.1  DCN1-like protein 4 isoform X4

    See identical proteins and their annotated locations for XP_011612840.1

    UniProtKB/TrEMBL
    H2ULW0
    Conserved Domains (1) summary
    pfam03556
    Location:118 → 227
    Cullin_binding; Cullin binding

  6. XM_011614539.2 → XP_011612841.1  DCN1-like protein 4 isoform X4

    See identical proteins and their annotated locations for XP_011612841.1

    UniProtKB/TrEMBL
    H2ULW0
    Conserved Domains (1) summary
    pfam03556
    Location:118 → 227
    Cullin_binding; Cullin binding

  7. XM_011614537.2 → XP_011612839.1  DCN1-like protein 4 isoform X4

    See identical proteins and their annotated locations for XP_011612839.1

    UniProtKB/TrEMBL
    H2ULW0
    Conserved Domains (1) summary
    pfam03556
    Location:118 → 227
    Cullin_binding; Cullin binding
Nucleotide Protein
Heading Accession and Version

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