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fbxo45 F-box protein 45 [ Takifugu rubripes (torafugu) ]

Gene ID: 101072333, updated on 8-Mar-2024

Summary

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Gene symbol
fbxo45
Gene description
F-box protein 45
See related
Ensembl:ENSTRUG00000006998
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 10
Exon count:
3
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 10 NC_042294.1 (2184137..2186800, complement)
101 previous assembly FUGU5 (GCF_000180615.1) 10 NC_018899.1 (510632..513013)

Chromosome 10 - NC_042294.1Genomic Context describing neighboring genes Neighboring gene SH3-domain GRB2-like endophilin B1a Neighboring gene negative regulator of reactive oxygen species Neighboring gene family with sequence similarity 168 member B Neighboring gene CCAAT/enhancer binding protein (C/EBP) 1 Neighboring gene neuroguidin, EIF4E binding protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse assembly involved in innervation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box/SPRY domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042294.1 Reference fTakRub1.2 Primary Assembly

    Range
    2184137..2186800 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003967812.3 → XP_003967861.1  F-box/SPRY domain-containing protein 1

    UniProtKB/TrEMBL
    H2SXP9
    Related
    ENSTRUP00000017187.2, ENSTRUT00000017260.3
    Conserved Domains (2) summary
    cd12907
    Location:115 → 289
    SPRY_Fbox; SPRY domain in the F-box family Fbxo45
    pfam12937
    Location:42 → 86
    F-box-like
Nucleotide Protein
Heading Accession and Version

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