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mia3 MIA SH3 domain ER export factor 3 [ Takifugu rubripes (torafugu) ]

Gene ID: 101071826, updated on 8-Mar-2024

Summary

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Gene symbol
mia3
Gene description
MIA SH3 domain ER export factor 3
See related
Ensembl:ENSTRUG00000021393
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Orthologs
human zebrafish all
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Genomic context

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See mia3 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
28
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 16 NC_042300.1 (10396173..10408403, complement)
101 previous assembly FUGU5 (GCF_000180615.1) 16 NC_018905.1 (8057591..8069657, complement)

Chromosome 16 - NC_042300.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 8, E3 ubiquitin protein ligase Neighboring gene axin interactor, dorsalization associated Neighboring gene TATA box binding protein (TBP)-associated factor, RNA polymerase I, A Neighboring gene dual specificity phosphatase 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle cargo loading IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum exit site IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transport and Golgi organization protein 1 homolog
Names
MIA family member 3, ER export factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042300.1 Reference fTakRub1.2 Primary Assembly

    Range
    10396173..10408403 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029849210.1 → XP_029705070.1  transport and Golgi organization protein 1 homolog isoform X4

    UniProtKB/TrEMBL
    A0A674PHJ0

  2. XM_011612183.2 → XP_011610485.2  transport and Golgi organization protein 1 homolog isoform X2

    UniProtKB/TrEMBL
    A0A674PHJ0
    Related
    ENSTRUP00000085212.1, ENSTRUT00000064371.1
    Conserved Domains (5) summary
    cd11893
    Location:114 → 186
    SH3_MIA3; Src Homology 3 domain of Melanoma Inhibitory Activity 3 protein
    COG1196
    Location:1086 → 1487
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    COG5271
    Location:232 → 741
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    PRK14951
    Location:1509 → 1631
    PRK14951; DNA polymerase III subunits gamma and tau; Provisional
    pfam06409
    Location:1053 → 1092
    NPIP; Nuclear pore complex interacting protein (NPIP)

  3. XM_029849211.1 → XP_029705071.1  transport and Golgi organization protein 1 homolog isoform X6

    UniProtKB/TrEMBL
    A0A674NBD7
    Conserved Domains (4) summary
    cd11893
    Location:114 → 186
    SH3_MIA3; Src Homology 3 domain of Melanoma Inhibitory Activity 3 protein
    COG1196
    Location:1086 → 1487
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    COG5271
    Location:232 → 741
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    pfam06409
    Location:1053 → 1092
    NPIP; Nuclear pore complex interacting protein (NPIP)

  4. XM_011612185.2 → XP_011610487.2  transport and Golgi organization protein 1 homolog isoform X5

    UniProtKB/TrEMBL
    A0A674NBD7

  5. XM_011612182.2 → XP_011610484.2  transport and Golgi organization protein 1 homolog isoform X1

    UniProtKB/TrEMBL
    A0A3B5KIG5
    Related
    ENSTRUP00000055167.2, ENSTRUT00000054357.2

  6. XM_011612184.2 → XP_011610486.2  transport and Golgi organization protein 1 homolog isoform X3

    UniProtKB/TrEMBL
    A0A674NBD7
    Related
    ENSTRUP00000071054.1, ENSTRUT00000062447.1
    Conserved Domains (5) summary
    cd11893
    Location:114 → 186
    SH3_MIA3; Src Homology 3 domain of Melanoma Inhibitory Activity 3 protein
    PHA03307
    Location:1523 → 1618
    PHA03307; transcriptional regulator ICP4; Provisional
    COG1196
    Location:1086 → 1487
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    COG5271
    Location:232 → 741
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    pfam06409
    Location:1053 → 1092
    NPIP; Nuclear pore complex interacting protein (NPIP)
Nucleotide Protein
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