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edn1 endothelin 1 [ Takifugu rubripes (torafugu) ]

Gene ID: 101069760, updated on 8-Mar-2024

Summary

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Gene symbol
edn1
Gene description
endothelin 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 12
Exon count:
5
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 12 NC_042296.1 (9656558..9658505, complement)
101 previous assembly FUGU5 (GCF_000180615.1) 12 NC_018901.1 (7591907..7593682, complement)

Chromosome 12 - NC_042296.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101079452 Neighboring gene uncharacterized LOC115251726 Neighboring gene uncharacterized LOC115251727 Neighboring gene HIVEP zinc finger 1 Neighboring gene transmembrane protein 170B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables endothelin A receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables endothelin B receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hormone activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular calcium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of prostaglandin-endoperoxide synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of systemic arterial blood pressure by endothelin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of vasoconstriction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vein smooth muscle contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
endothelin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042296.1 Reference fTakRub1.2 Primary Assembly

    Range
    9656558..9658505 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011609319.2 → XP_011607621.2  endothelin-1

    Conserved Domains (1) summary
    pfam00322
    Location:36 → 64
    Endothelin; Endothelin family
Nucleotide Protein
Heading Accession and Version

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