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LOC101068653 polycomb group RING finger protein 5-B [ Takifugu rubripes (torafugu) ]

Gene ID: 101068653, updated on 25-Jan-2024

Summary

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Gene symbol
LOC101068653
Gene description
polycomb group RING finger protein 5-B
See related
Ensembl:ENSTRUG00000002926
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Also known as
pcgf5
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) Unplaced Scaffold NW_021821670.1 (45177..51737, complement)
101 previous assembly FUGU5 (GCF_000180615.1) Unplaced Scaffold NW_004071307.1 (8965..15358, complement)

NW_021821670.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain-containing protein 1-like Neighboring gene high affinity choline transporter 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of PRC1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polycomb group RING finger protein 5-B
Names
polycomb group ring finger 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NW_021821670.1 Reference fTakRub1.2 Primary Assembly

    Range
    45177..51737 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011617560.2 → XP_011615862.1  polycomb group RING finger protein 5-B

    See identical proteins and their annotated locations for XP_011615862.1

    UniProtKB/TrEMBL
    A0A3B5KLC5, A0A674MMM3
    Related
    ENSTRUP00000070393.1, ENSTRUT00000059015.1
    Conserved Domains (2) summary
    cd16735
    Location:29 → 75
    RING-HC_PCGF3; RING finger found in polycomb group RING finger protein 3 (PCGF3) and similar proteins
    cd17084
    Location:157 → 257
    RAWUL_PCGF5; RING finger- and WD40-associated ubiquitin-like (RAWUL) domain found in polycomb group RING finger protein 5 (PCGF5) and similar proteins

  2. XM_029832561.1 → XP_029688421.1  polycomb group RING finger protein 5-B

    UniProtKB/TrEMBL
    A0A3B5KLC5, A0A674MMM3
    Conserved Domains (2) summary
    cd16735
    Location:29 → 75
    RING-HC_PCGF3; RING finger found in polycomb group RING finger protein 3 (PCGF3) and similar proteins
    cd17084
    Location:157 → 257
    RAWUL_PCGF5; RING finger- and WD40-associated ubiquitin-like (RAWUL) domain found in polycomb group RING finger protein 5 (PCGF5) and similar proteins
Nucleotide Protein
Heading Accession and Version

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