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hat1 histone acetyltransferase 1 [ Takifugu rubripes (torafugu) ]

Gene ID: 101065568, updated on 8-Mar-2024

Summary

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Gene symbol
hat1
Gene description
histone acetyltransferase 1
See related
Ensembl:ENSTRUG00000017744
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 1
Exon count:
12
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 1 NC_042285.1 (19516034..19527300, complement)
101 previous assembly FUGU5 (GCF_000180615.1) 1 NC_018890.1 (15378220..15389459, complement)

Chromosome 1 - NC_042285.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105417246 Neighboring gene distal-less homeobox 2a Neighboring gene distal-less homeobox 1a Neighboring gene calcium-binding mitochondrial carrier protein Aralar1 Neighboring gene cytoplasmic dynein 1 intermediate chain 2-like Neighboring gene cytochrome b reductase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone H4 acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in subtelomeric heterochromatin formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone acetyltransferase type B catalytic subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042285.1 Reference fTakRub1.2 Primary Assembly

    Range
    19516034..19527300 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011609747.2 → XP_011608049.1  histone acetyltransferase type B catalytic subunit

    See identical proteins and their annotated locations for XP_011608049.1

    UniProtKB/TrEMBL
    A0A674PAL2, H2V8E9
    Related
    ENSTRUP00000045488.2, ENSTRUT00000045642.3
    Conserved Domains (1) summary
    pfam10394
    Location:14 → 175
    Hat1_N; Histone acetyl transferase HAT1 N-terminus

  2. XM_003961913.3 → XP_003961962.1  histone acetyltransferase type B catalytic subunit

    See identical proteins and their annotated locations for XP_003961962.1

    UniProtKB/TrEMBL
    A0A674PAL2, H2V8E9
    Related
    ENSTRUP00000079167.1, ENSTRUT00000087133.1
    Conserved Domains (1) summary
    pfam10394
    Location:14 → 175
    Hat1_N; Histone acetyl transferase HAT1 N-terminus
Nucleotide Protein
Heading Accession and Version

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