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tulp4a TUB like protein 4a [ Takifugu rubripes (torafugu) ]

Gene ID: 101065167, updated on 8-Mar-2024

Summary

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Gene symbol
tulp4a
Gene description
TUB like protein 4a
See related
Ensembl:ENSTRUG00000008661
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Also known as
tulp4
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 16
Exon count:
15
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 16 NC_042300.1 (12114133..12130606)
101 previous assembly FUGU5 (GCF_000180615.1) Unplaced Scaffold NW_004071327.1 (9530..25594, complement)

Chromosome 16 - NC_042300.1Genomic Context describing neighboring genes Neighboring gene mesogenin 1 Neighboring gene mitochondrial ribosomal protein S10 Neighboring gene transmembrane protein 181 Neighboring gene U2 spliceosomal RNA Neighboring gene dynein light chain Tctex-type 1b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tubby-related protein 4
Names
TUB like protein 4
tubby like protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042300.1 Reference fTakRub1.2 Primary Assembly

    Range
    12114133..12130606
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029849128.1 → XP_029704988.1  tubby-related protein 4

    UniProtKB/TrEMBL
    A0A674P096
    Related
    ENSTRUP00000079185.1, ENSTRUT00000081618.1
    Conserved Domains (4) summary
    COG2319
    Location:48 → 352
    WD40; WD40 repeat [General function prediction only]
    pfam05109
    Location:1083 → 1315
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    sd00039
    Location:85 → 123
    7WD40; WD40 repeat [structural motif]
    pfam01167
    Location:1508 → 1607
    Tub; Tub family
Nucleotide Protein
Heading Accession and Version

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