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tapt1b transmembrane anterior posterior transformation 1b [ Takifugu rubripes (torafugu) ]

Gene ID: 101064041, updated on 8-Mar-2024

Summary

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Gene symbol
tapt1b
Gene description
transmembrane anterior posterior transformation 1b
See related
Ensembl:ENSTRUG00000015598
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Also known as
tapt1
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 17
Exon count:
14
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 17 NC_042301.1 (12580096..12586382)
101 previous assembly FUGU5 (GCF_000180615.1) 17 NC_018906.1 (7219901..7226141)

Chromosome 17 - NC_042301.1Genomic Context describing neighboring genes Neighboring gene mediator complex subunit 28 Neighboring gene leucine aminopeptidase 3 Neighboring gene clarin 2 Neighboring gene prominin 1 b Neighboring gene fibroblast growth factor binding protein 2b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in maintenance of protein localization in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ciliary basal body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane anterior posterior transformation protein 1 homolog
Names
transmembrane anterior posterior transformation 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042301.1 Reference fTakRub1.2 Primary Assembly

    Range
    12580096..12586382
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003972474.3 → XP_003972523.1  transmembrane anterior posterior transformation protein 1 homolog

    UniProtKB/TrEMBL
    A0A674NBD2, H2USE8
    Related
    ENSTRUP00000039871.3, ENSTRUT00000040012.3
    Conserved Domains (1) summary
    pfam05346
    Location:148 → 448
    DUF747; Eukaryotic membrane protein family
Nucleotide Protein
Heading Accession and Version

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