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myom1b myomesin 1b [ Takifugu rubripes (torafugu) ]

Gene ID: 101063877, updated on 8-Mar-2024

Summary

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Gene symbol
myom1b
Gene description
myomesin 1b
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Also known as
myom1
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 10
Exon count:
41
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 10 NC_042294.1 (8337060..8354427, complement)
101 previous assembly FUGU5 (GCF_000180615.1) 10 NC_018899.1 (6179201..6194400, complement)

Chromosome 10 - NC_042294.1Genomic Context describing neighboring genes Neighboring gene methyltransferase 4, N6-adenosine Neighboring gene elastin microfibril interfacer 2b Neighboring gene lipin 2 Neighboring gene uncharacterized LOC115251175 Neighboring gene myosin, light chain 12, genome duplicate 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myomesin-1
Names
myomesin 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042294.1 Reference fTakRub1.2 Primary Assembly

    Range
    8337060..8354427 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029842429.1 → XP_029698289.1  myomesin-1 isoform X5

    Conserved Domains (3) summary
    cd00063
    Location:367 → 460
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:10 → 102
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:1225 → 1316
    Ig; Immunoglobulin domain

  2. XM_029842426.1 → XP_029698286.1  myomesin-1 isoform X3

  3. XM_029842425.1 → XP_029698285.1  myomesin-1 isoform X2

    Conserved Domains (3) summary
    cd00063
    Location:524 → 617
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:172 → 264
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:1382 → 1473
    Ig; Immunoglobulin domain

  4. XM_029842427.1 → XP_029698287.1  myomesin-1 isoform X4

  5. XM_029842424.1 → XP_029698284.1  myomesin-1 isoform X1

    Conserved Domains (3) summary
    cd00063
    Location:529 → 622
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:172 → 264
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:1387 → 1478
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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