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fbxl3a F-box and leucine-rich repeat protein 3a [ Takifugu rubripes (torafugu) ]

Gene ID: 101063045, updated on 8-Mar-2024

Summary

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Gene symbol
fbxl3a
Gene description
F-box and leucine-rich repeat protein 3a
See related
Ensembl:ENSTRUG00000010459
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Also known as
fbxl3
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 1
Exon count:
5
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 1 NC_042285.1 (15930829..15936769, complement)
101 previous assembly FUGU5 (GCF_000180615.1) 1 NC_018890.1 (11901621..11912047, complement)

Chromosome 1 - NC_042285.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101063493 Neighboring gene CLN5 intracellular trafficking protein Neighboring gene MYC binding protein 2 Neighboring gene sciellin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G2/M transition of mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in entrainment of circadian clock by photoperiod IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box/LRR-repeat protein 3
Names
F-box and leucine rich repeat protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042285.1 Reference fTakRub1.2 Primary Assembly

    Range
    15930829..15936769 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003961651.3 → XP_003961700.1  F-box/LRR-repeat protein 3

    UniProtKB/TrEMBL
    H2TNS0
    Related
    ENSTRUP00000075116.1, ENSTRUT00000068808.1
    Conserved Domains (3) summary
    cd09293
    Location:335 → 400
    AMN1; Antagonist of mitotic exit network protein 1
    sd00034
    Location:183 → 208
    LRR_AMN1; leucine-rich repeat [structural motif]
    pfam12937
    Location:45 → 86
    F-box-like
Nucleotide Protein
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