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sycp3 synaptonemal complex protein 3 [ Takifugu rubripes (torafugu) ]

Gene ID: 101061864, updated on 8-Mar-2024

Summary

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Gene symbol
sycp3
Gene description
synaptonemal complex protein 3
See related
Ensembl:ENSTRUG00000013870
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Orthologs
human zebrafish all
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Genomic context

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See sycp3 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
9
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 9 NC_042293.1 (6517532..6519799, complement)
101 previous assembly FUGU5 (GCF_000180615.1) 9 NC_018898.1 (5445431..5447780, complement)

Chromosome 9 - NC_042293.1Genomic Context describing neighboring genes Neighboring gene PCNA clamp associated factor Neighboring gene NEDD1 gamma-tubulin ring complex targeting factor Neighboring gene actin related protein 6 Neighboring gene uncharacterized LOC101073603

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in meiotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in spermatid development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in synaptonemal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
synaptonemal complex protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042293.1 Reference fTakRub1.2 Primary Assembly

    Range
    6517532..6519799 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011607222.2 → XP_011605524.1  synaptonemal complex protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A3B5K3V9
    Related
    ENSTRUP00000048013.2, ENSTRUT00000054922.2
    Conserved Domains (1) summary
    pfam04803
    Location:87 → 218
    Cor1; Cor1/Xlr/Xmr conserved region

  2. XM_029841682.1 → XP_029697542.1  synaptonemal complex protein 3 isoform X3

  3. XM_029841680.1 → XP_029697540.1  synaptonemal complex protein 3 isoform X2

    Conserved Domains (1) summary
    pfam04803
    Location:86 → 217
    Cor1; Cor1/Xlr/Xmr conserved region

  4. XM_029841678.1 → XP_029697538.1  synaptonemal complex protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A3B5K3V9
    Conserved Domains (1) summary
    pfam04803
    Location:87 → 218
    Cor1; Cor1/Xlr/Xmr conserved region

  5. XM_029841681.1 → XP_029697541.1  synaptonemal complex protein 3 isoform X3

Nucleotide Protein
Heading Accession and Version

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