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TMEM239 transmembrane protein 239 [ Pan troglodytes (chimpanzee) ]

Gene ID: 101059321, updated on 29-Mar-2024

Summary

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Official Symbol
TMEM239provided by VGNC
Official Full Name
transmembrane protein 239provided by VGNC
Primary source
VGNC:VGNC:6284
Locus tag
CK820_G0017462
See related
Ensembl:ENSPTRG00000045802
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 20
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 21 NC_072419.2 (9433932..9435108)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 20 NC_072418.1 (1201952..1203710, complement)

Chromosome 21 - NC_072419.2Genomic Context describing neighboring genes Neighboring gene chromosome 20 C20orf141 homolog Neighboring gene carboxypeptidase X, M14 family member 1 Neighboring gene PC-esterase domain containing 1A Neighboring gene VPS16 core subunit of CORVET and HOPS complexes Neighboring gene protein tyrosine phosphatase receptor type A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Major chimpanzee-specific structural changes in sperm development-associated genes. Kim RN, et al. Funct Integr Genomics, 2011 Sep. PMID 21484476

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
transmembrane protein 239

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072419.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    9433932..9435108
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016937339.2 → XP_016792828.1  transmembrane protein 239 isoform X1

    UniProtKB/TrEMBL
    A0A2I3S468, A0A2J8MS71, A0A6D2VTX6
    Related
    ENSPTRP00000071815.1
    Conserved Domains (1) summary
    pfam15841
    Location:45 → 193
    TMEM239; Transmembrane protein 239 family

  2. XM_016937341.3 → XP_016792830.1  transmembrane protein 239 isoform X3

    UniProtKB/TrEMBL
    A0A2J8MS67, G2HJV3
    Conserved Domains (1) summary
    pfam15841
    Location:2 → 150
    TMEM239; Transmembrane protein 239 family

  3. XM_016937342.2 → XP_016792831.1  transmembrane protein 239 isoform X3

    UniProtKB/TrEMBL
    A0A2J8MS67, G2HJV3
    Conserved Domains (1) summary
    pfam15841
    Location:2 → 150
    TMEM239; Transmembrane protein 239 family

  4. XM_063803202.1 → XP_063659272.1  transmembrane protein 239 isoform X2

Nucleotide Protein
Heading Accession and Version

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