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HIVEP1 HIVEP zinc finger 1 [ Saimiri boliviensis (Bolivian squirrel monkey) ]

Gene ID: 101053310, updated on 8-Mar-2024

Summary

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Gene symbol
HIVEP1
Gene description
HIVEP zinc finger 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Saimiri boliviensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Saimiriinae; Saimiri
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current BCM_Sbol_2.0 (GCF_016699345.1) Unplaced Scaffold NW_024100952.1 (11981691..12061418)

NW_024100952.1Genomic Context describing neighboring genes Neighboring gene S-adenosylmethionine decarboxylase proenzyme-like Neighboring gene 60S ribosomal protein L37-like Neighboring gene endothelin 1 Neighboring gene uncharacterized LOC120361154

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024100952 Unplaced Scaffold Reference BCM_Sbol_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 40
Names
human immunodeficiency virus type I enhancer binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Saimiri boliviensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Sbol_2.0 Primary Assembly

Genomic

  1. NW_024100952.1 Reference BCM_Sbol_2.0 Primary Assembly

    Range
    11981691..12061418
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039462596.1 → XP_039318530.1  zinc finger protein 40

    UniProtKB/TrEMBL
    A0A2K6S915
    Conserved Domains (6) summary
    PHA03247
    Location:2365 → 2809
    PHA03247; large tegument protein UL36; Provisional
    sd00017
    Location:512 → 532
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:2194 → 2214
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:2192 → 2214
    zf-C2H2; Zinc finger, C2H2 type
    pfam12756
    Location:2220 → 2285
    zf-C2H2_2; C2H2 type zinc-finger (2 copies)
    pfam13465
    Location:525 → 549
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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