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HOXA9 homeobox A9 [ Saimiri boliviensis (Bolivian squirrel monkey) ]

Gene ID: 101050581, updated on 8-Mar-2024

Summary

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Gene symbol
HOXA9
Gene description
homeobox A9
See related
EnsemblRapid:ENSSBOG00000040219
Gene type
protein coding
RefSeq status
MODEL
Organism
Saimiri boliviensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Saimiriinae; Saimiri
Orthologs
human all
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Genomic context

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Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
102 current BCM_Sbol_2.0 (GCF_016699345.1) Unplaced Scaffold NW_024100925.1 (5036830..5040211)

NW_024100925.1Genomic Context describing neighboring genes Neighboring gene homeobox A11 Neighboring gene uncharacterized LOC120365316 Neighboring gene homeobox A10 Neighboring gene uncharacterized LOC104652503 Neighboring gene homeobox A7 Neighboring gene homeobox A3 Neighboring gene homeobox A6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024100925 Unplaced Scaffold Reference BCM_Sbol_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in anterior/posterior pattern specification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in embryonic skeletal system morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proximal/distal pattern formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox protein Hox-A9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Saimiri boliviensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Sbol_2.0 Primary Assembly

Genomic

  1. NW_024100925.1 Reference BCM_Sbol_2.0 Primary Assembly

    Range
    5036830..5040211
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010345698.2 → XP_010344000.1  homeobox protein Hox-A9 isoform X1

    UniProtKB/TrEMBL
    A0A2K6USI0
    Related
    ENSSBOP00000041601.1, ENSSBOT00000073512.1
    Conserved Domains (2) summary
    pfam00046
    Location:210 → 263
    Homeobox; Homeobox domain
    pfam04617
    Location:1 → 194
    Hox9_act; Hox9 activation region

  2. XM_010345699.2 → XP_010344001.1  homeobox protein Hox-A9 isoform X2

    Conserved Domains (1) summary
    pfam04617
    Location:81 → 107
    Hox9_act; Hox9 activation region
Nucleotide Protein
Heading Accession and Version

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