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CLIP4 CAP-Gly domain containing linker protein family member 4 [ Saimiri boliviensis (Bolivian squirrel monkey) ]

Gene ID: 101046080, updated on 8-Mar-2024

Summary

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Gene symbol
CLIP4
Gene description
CAP-Gly domain containing linker protein family member 4
See related
EnsemblRapid:ENSSBOG00000030677
Gene type
protein coding
RefSeq status
MODEL
Organism
Saimiri boliviensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Saimiriinae; Saimiri
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
102 current BCM_Sbol_2.0 (GCF_016699345.1) Unplaced Scaffold NW_024100918.1 (118985907..119115889, complement)

NW_024100918.1Genomic Context describing neighboring genes Neighboring gene yippee like 5 Neighboring gene ALK receptor tyrosine kinase Neighboring gene 28S ribosomal protein S18c, mitochondrial-like Neighboring gene TOG array regulator of axonemal microtubules 2 Neighboring gene photoreceptor cilium actin regulator Neighboring gene small nucleolar RNA SNORD53/SNORD92 Neighboring gene WD repeat domain 43

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024100918 Unplaced Scaffold Reference BCM_Sbol_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables microtubule plus-end binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic microtubule organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule plus-end IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CAP-Gly domain-containing linker protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Saimiri boliviensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Sbol_2.0 Primary Assembly

Genomic

  1. NW_024100918.1 Reference BCM_Sbol_2.0 Primary Assembly

    Range
    118985907..119115889 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039460520.1 → XP_039316454.1  CAP-Gly domain-containing linker protein 4

    UniProtKB/TrEMBL
    A0A2K6U9W8
    Conserved Domains (3) summary
    COG0666
    Location:34 → 225
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:153 → 184
    ANK; ANK repeat [structural motif]
    pfam01302
    Location:487 → 551
    CAP_GLY; CAP-Gly domain

  2. XM_010352303.2 → XP_010350605.1  CAP-Gly domain-containing linker protein 4

    See identical proteins and their annotated locations for XP_010350605.1

    UniProtKB/TrEMBL
    A0A2K6U9W8
    Conserved Domains (3) summary
    COG0666
    Location:34 → 225
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:153 → 184
    ANK; ANK repeat [structural motif]
    pfam01302
    Location:487 → 551
    CAP_GLY; CAP-Gly domain

  3. XM_039460525.1 → XP_039316459.1  CAP-Gly domain-containing linker protein 4

    UniProtKB/TrEMBL
    A0A2K6U9W8
    Conserved Domains (3) summary
    COG0666
    Location:34 → 225
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:153 → 184
    ANK; ANK repeat [structural motif]
    pfam01302
    Location:487 → 551
    CAP_GLY; CAP-Gly domain

  4. XM_010352302.2 → XP_010350604.1  CAP-Gly domain-containing linker protein 4

    See identical proteins and their annotated locations for XP_010350604.1

    UniProtKB/TrEMBL
    A0A2K6U9W8
    Related
    ENSSBOP00000028684.1, ENSSBOT00000045564.2
    Conserved Domains (3) summary
    COG0666
    Location:34 → 225
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:153 → 184
    ANK; ANK repeat [structural motif]
    pfam01302
    Location:487 → 551
    CAP_GLY; CAP-Gly domain

  5. XM_039460504.1 → XP_039316438.1  CAP-Gly domain-containing linker protein 4

    UniProtKB/TrEMBL
    A0A2K6U9W8
    Related
    ENSSBOP00000028654.2, ENSSBOT00000045534.2
    Conserved Domains (3) summary
    COG0666
    Location:34 → 225
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:153 → 184
    ANK; ANK repeat [structural motif]
    pfam01302
    Location:487 → 551
    CAP_GLY; CAP-Gly domain
Nucleotide Protein
Heading Accession and Version

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