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CCS copper chaperone for superoxide dismutase [ Saimiri boliviensis (Bolivian squirrel monkey) ]

Gene ID: 101040208, updated on 8-Mar-2024

Summary

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Gene symbol
CCS
Gene description
copper chaperone for superoxide dismutase
See related
EnsemblRapid:ENSSBOG00000024367
Gene type
protein coding
RefSeq status
MODEL
Organism
Saimiri boliviensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Saimiriinae; Saimiri
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current BCM_Sbol_2.0 (GCF_016699345.1) Unplaced Scaffold NW_024100923.1 (95218057..95227638)

NW_024100923.1Genomic Context describing neighboring genes Neighboring gene cathepsin F Neighboring gene coiled-coil domain containing 87 Neighboring gene RNA-binding protein 14 Neighboring gene RNA-binding protein 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024100923 Unplaced Scaffold Reference BCM_Sbol_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in removal of superoxide radicals IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
copper chaperone for superoxide dismutase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Saimiri boliviensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Sbol_2.0 Primary Assembly

Genomic

  1. NW_024100923.1 Reference BCM_Sbol_2.0 Primary Assembly

    Range
    95218057..95227638
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003941223.2 → XP_003941272.1  copper chaperone for superoxide dismutase

    UniProtKB/TrEMBL
    A0A2K6T6L0
    Related
    ENSSBOP00000015265.2, ENSSBOT00000032064.2
    Conserved Domains (3) summary
    PLN02957
    Location:14 → 253
    PLN02957; copper, zinc superoxide dismutase
    cd00305
    Location:89 → 227
    Cu-Zn_Superoxide_Dismutase; Copper/zinc superoxide dismutase (SOD). superoxide dismutases catalyse the conversion of superoxide radicals to molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the copper/zinc-binding family is one. Defects in the ...
    cd00371
    Location:15 → 73
    HMA; Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones. HMA domain ...
Nucleotide Protein
Heading Accession and Version

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