U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TNRC6B trinucleotide repeat containing adaptor 6B [ Saimiri boliviensis (Bolivian squirrel monkey) ]

Gene ID: 101035067, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
TNRC6B
Gene description
trinucleotide repeat containing adaptor 6B
See related
EnsemblRapid:ENSSBOG00000029743
Gene type
protein coding
RefSeq status
MODEL
Organism
Saimiri boliviensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Saimiriinae; Saimiri
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See TNRC6B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
26
Annotation release Status Assembly Chr Location
102 current BCM_Sbol_2.0 (GCF_016699345.1) Unplaced Scaffold NW_024100954.1 (9467558..9753006, complement)

NW_024100954.1Genomic Context describing neighboring genes Neighboring gene small G protein signaling modulator 3 Neighboring gene adenylosuccinate lyase Neighboring gene small nucleolar RNA SNORD44 Neighboring gene family with sequence similarity 83 member F Neighboring gene GRB2 related adaptor protein 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_024100954 Unplaced Scaffold Reference BCM_Sbol_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in miRNA-mediated post-transcriptional gene silencing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of nuclear-transcribed mRNA poly(A) tail shortening IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in P-body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
trinucleotide repeat-containing gene 6B protein
Names
trinucleotide repeat containing 6B

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Saimiri boliviensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Sbol_2.0 Primary Assembly

Genomic

  1. NW_024100954.1 Reference BCM_Sbol_2.0 Primary Assembly

    Range
    9467558..9753006 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039463071.1 → XP_039319005.1  trinucleotide repeat-containing gene 6B protein isoform X1

    UniProtKB/TrEMBL
    A0A2K6U4V5
    Conserved Domains (4) summary
    pfam10427
    Location:958 → 1101
    Ago_hook; Argonaute hook
    pfam16608
    Location:1339 → 1624
    TNRC6-PABC_bdg; TNRC6-PABC binding domain
    cd12712
    Location:1626 → 1708
    RRM_TNRC6B; RNA recognition motif (RRM) found in vertebrate trinucleotide repeat-containing gene 6B protein (TNRC6B)
    NF033849
    Location:359 → 626
    ser_rich_anae_1; serine-rich protein

  2. XM_010343424.2 → XP_010341726.2  trinucleotide repeat-containing gene 6B protein isoform X2

    UniProtKB/TrEMBL
    A0A2K6U4S7
    Related
    ENSSBOP00000026916.1, ENSSBOT00000043792.2
    Conserved Domains (4) summary
    pfam10427
    Location:881 → 1012
    Ago_hook; Argonaute hook
    pfam16608
    Location:1250 → 1535
    TNRC6-PABC_bdg; TNRC6-PABC binding domain
    cd12712
    Location:1537 → 1619
    RRM_TNRC6B; RNA recognition motif (RRM) found in vertebrate trinucleotide repeat-containing gene 6B protein (TNRC6B)
    NF033849
    Location:323 → 590
    ser_rich_anae_1; serine-rich protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.