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PDGFA platelet derived growth factor subunit A [ Saimiri boliviensis (Bolivian squirrel monkey) ]

Gene ID: 101034511, updated on 8-Mar-2024

Summary

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Gene symbol
PDGFA
Gene description
platelet derived growth factor subunit A
See related
EnsemblRapid:ENSSBOG00000037272
Gene type
protein coding
RefSeq status
MODEL
Organism
Saimiri boliviensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Saimiriinae; Saimiri
Orthologs
human mouse all
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Genomic context

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See PDGFA in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current BCM_Sbol_2.0 (GCF_016699345.1) Unplaced Scaffold NW_024100917.1 (151260692..151283601)

NW_024100917.1Genomic Context describing neighboring genes Neighboring gene dynein axonemal assembly factor 5 Neighboring gene TAR DNA-binding protein 43-like Neighboring gene uncharacterized LOC120364906 Neighboring gene protein kinase cAMP-dependent type I regulatory subunit beta Neighboring gene uncharacterized LOC101039789 Neighboring gene forkhead box L3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024100917 Unplaced Scaffold Reference BCM_Sbol_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables growth factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables platelet-derived growth factor receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in platelet-derived growth factor receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of ERK1 and ERK2 cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of MAP kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cell population proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of protein autophosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
platelet-derived growth factor subunit A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Saimiri boliviensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Sbol_2.0 Primary Assembly

Genomic

  1. NW_024100917.1 Reference BCM_Sbol_2.0 Primary Assembly

    Range
    151260692..151283601
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010331642.2 → XP_010329944.1  platelet-derived growth factor subunit A isoform X3

    Conserved Domains (2) summary
    smart00141
    Location:139 → 226
    PDGF; Platelet-derived and vascular endothelial growth factors (PDGF, VEGF) family
    pfam04692
    Location:96 → 140
    PDGF_N; Platelet-derived growth factor, N terminal region

  2. XM_010331643.2 → XP_010329945.1  platelet-derived growth factor subunit A isoform X4

    UniProtKB/TrEMBL
    A0A2K6THK5, A0A2K6THM3
    Related
    ENSSBOP00000045525.1, ENSSBOT00000071274.1
    Conserved Domains (2) summary
    smart00141
    Location:132 → 219
    PDGF; Platelet-derived and vascular endothelial growth factors (PDGF, VEGF) family
    pfam04692
    Location:59 → 133
    PDGF_N; Platelet-derived growth factor, N terminal region

  3. XM_003943760.3 → XP_003943809.1  platelet-derived growth factor subunit A isoform X1

    UniProtKB/TrEMBL
    A0A2K6THL0
    Conserved Domains (2) summary
    smart00141
    Location:94 → 181
    PDGF; Platelet-derived and vascular endothelial growth factors (PDGF, VEGF) family
    pfam04692
    Location:21 → 95
    PDGF_N; Platelet-derived growth factor, N terminal region

  4. XM_003943759.3 → XP_003943808.1  platelet-derived growth factor subunit A isoform X2

    UniProtKB/TrEMBL
    A0A2K6THK5
    Related
    ENSSBOP00000019134.2, ENSSBOT00000035952.2
    Conserved Domains (2) summary
    smart00141
    Location:94 → 181
    PDGF; Platelet-derived and vascular endothelial growth factors (PDGF, VEGF) family
    pfam04692
    Location:21 → 95
    PDGF_N; Platelet-derived growth factor, N terminal region
Nucleotide Protein
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