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PDE6B phosphodiesterase 6B [ Papio anubis (olive baboon) ]

Gene ID: 101023552, updated on 8-Mar-2024

Summary

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Gene symbol
PDE6B
Gene description
phosphodiesterase 6B
See related
Ensembl:ENSPANG00000019722
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
22
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 3 NC_044978.1 (184359460..184403707, complement)
103 previous assembly Panu_3.0 (GCF_000264685.3) 5 NC_018156.2 (567853..612042)

Chromosome 3 - NC_044978.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 49 member 3 Neighboring gene myosin light chain 5 Neighboring gene ATP synthase membrane subunit e Neighboring gene uncharacterized LOC116274231 Neighboring gene transmembrane protein 271

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-nucleotide phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in retina development in camera-type eye IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in photoreceptor outer segment membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044978.1 Reference Panubis1.0 Primary Assembly

    Range
    184359460..184403707 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031664814.1 → XP_031520674.1  rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta isoform X2

    UniProtKB/TrEMBL
    A0A096NDX3
    Related
    ENSPANP00000011073.3, ENSPANT00000009624.3
    Conserved Domains (2) summary
    smart00065
    Location:71 → 230
    GAF; Domain present in phytochromes and cGMP-specific phosphodiesterases
    pfam00233
    Location:556 → 801
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  2. XM_031664813.1 → XP_031520673.1  rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta isoform X1

    Conserved Domains (2) summary
    smart00065
    Location:1 → 54
    GAF; Domain present in phytochromes and cGMP-specific phosphodiesterases
    pfam00233
    Location:171 → 416
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
Nucleotide Protein
Heading Accession and Version

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