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TSPAN3 tetraspanin 3 [ Papio anubis (olive baboon) ]

Gene ID: 101022681, updated on 8-Mar-2024

Summary

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Gene symbol
TSPAN3
Gene description
tetraspanin 3
See related
Ensembl:ENSPANG00000015862
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
8
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 7 NC_044982.1 (111961686..111993928)
103 previous assembly Panu_3.0 (GCF_000264685.3) 7 NC_018158.2 (51730685..51762931, complement)

Chromosome 7 - NC_044982.1Genomic Context describing neighboring genes Neighboring gene high mobility group 20A Neighboring gene pseudopodium enriched atypical kinase 1 Neighboring gene non-histone chromosomal protein HMG-17 pseudogene Neighboring gene proline-serine-threonine phosphatase interacting protein 1 Neighboring gene keratin, type II cytoskeletal 8 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein localization to plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein maturation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of vascular endothelial growth factor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tetraspanin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044982.1 Reference Panubis1.0 Primary Assembly

    Range
    111961686..111993928
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021940780.2 → XP_021796472.1  tetraspanin-3 isoform X2

    Conserved Domains (1) summary
    cd03163
    Location:104 → 210
    TM4SF8_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF8_like subfamily. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...

  2. XM_003901250.4 → XP_003901299.1  tetraspanin-3 isoform X1

    See identical proteins and their annotated locations for XP_003901299.1

    UniProtKB/TrEMBL
    A0A096NMU6
    Related
    ENSPANP00000014306.2, ENSPANT00000004820.3
    Conserved Domains (2) summary
    cd03163
    Location:104 → 210
    TM4SF8_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF8_like subfamily. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
    pfam00335
    Location:9 → 232
    Tetraspannin; Tetraspanin family

  3. XM_009210698.2 → XP_009208962.1  tetraspanin-3 isoform X3

    See identical proteins and their annotated locations for XP_009208962.1

    Conserved Domains (1) summary
    cd03163
    Location:65 → 171
    TM4SF8_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF8_like subfamily. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
Nucleotide Protein
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