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EDEM2 ER degradation enhancing alpha-mannosidase like protein 2 [ Papio anubis (olive baboon) ]

Gene ID: 101016705, updated on 8-Mar-2024

Summary

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Gene symbol
EDEM2
Gene description
ER degradation enhancing alpha-mannosidase like protein 2
See related
Ensembl:ENSPANG00000025548
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 16
Exon count:
11
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 16 NC_044991.1 (62255008..62288167, complement)
103 previous assembly Panu_3.0 (GCF_000264685.3) 10 NC_018161.2 (29208961..29242768)

Chromosome 16 - NC_044991.1Genomic Context describing neighboring genes Neighboring gene myosin heavy chain 7B Neighboring gene transient receptor potential cation channel subfamily C member 4 associated protein Neighboring gene short transient receptor potential channel 4-associated protein-like Neighboring gene small nucleolar RNA SNORD56 Neighboring gene protein C receptor Neighboring gene MMP24 opposite strand Neighboring gene matrix metallopeptidase 24

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum mannose trimming IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mannose trimming involved in glycoprotein ERAD pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ER degradation-enhancing alpha-mannosidase-like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044991.1 Reference Panubis1.0 Primary Assembly

    Range
    62255008..62288167 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003904815.3 → XP_003904864.1  ER degradation-enhancing alpha-mannosidase-like protein 2 isoform X1

    See identical proteins and their annotated locations for XP_003904864.1

    UniProtKB/TrEMBL
    A0A096NUQ6
    Related
    ENSPANP00000016780.1, ENSPANT00000003830.3
    Conserved Domains (1) summary
    pfam01532
    Location:42 → 480
    Glyco_hydro_47; Glycosyl hydrolase family 47

  2. XM_017944867.3 → XP_017800356.1  ER degradation-enhancing alpha-mannosidase-like protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A8I5NDP4
    Related
    ENSPANP00000056620.1, ENSPANT00000078264.1

  3. XM_003904816.3 → XP_003904865.1  ER degradation-enhancing alpha-mannosidase-like protein 2 isoform X2

    See identical proteins and their annotated locations for XP_003904865.1

    UniProtKB/TrEMBL
    A0A2I3MIJ9
    Related
    ENSPANP00000035526.1, ENSPANT00000049552.2
    Conserved Domains (1) summary
    pfam01532
    Location:36 → 443
    Glyco_hydro_47; Glycosyl hydrolase family 47
Nucleotide Protein
Heading Accession and Version

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