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TRNAU1AP tRNA selenocysteine 1 associated protein 1 [ Papio anubis (olive baboon) ]

Gene ID: 101011824, updated on 8-Mar-2024

Summary

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Gene symbol
TRNAU1AP
Gene description
tRNA selenocysteine 1 associated protein 1
See related
Ensembl:ENSPANG00000016019
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human mouse all
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Genomic context

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See TRNAU1AP in Genome Data Viewer
Location:
chromosome: 1
Exon count:
10
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 1 NC_044976.1 (26912920..26941808)
103 previous assembly Panu_3.0 (GCF_000264685.3) 1 NC_018152.2 (26880835..26910308)

Chromosome 1 - NC_044976.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103882919 Neighboring gene small nucleolar RNA SNORA73 family Neighboring gene small nucleolar RNA U13 Neighboring gene regulator of chromosome condensation 1 Neighboring gene NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6-like Neighboring gene uncharacterized LOC101013261 Neighboring gene small nucleolar RNA SNORD99 Neighboring gene small nucleolar RNA SNORA61

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in selenocysteine incorporation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tRNA selenocysteine 1-associated protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044976.1 Reference Panubis1.0 Primary Assembly

    Range
    26912920..26941808
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009203201.4 → XP_009201465.1  tRNA selenocysteine 1-associated protein 1 isoform X3

    See identical proteins and their annotated locations for XP_009201465.1

    Conserved Domains (3) summary
    pfam17654
    Location:165 → 244
    Trnau1ap; Selenocysteine tRNA 1 associated proteins
    cd12610
    Location:4 → 87
    RRM1_SECp43; RNA recognition motif 1 (RRM1) found in tRNA selenocysteine-associated protein 1 (SECp43)
    cl17169
    Location:95 → 137
    RRM_SF; RNA recognition motif (RRM) superfamily

  2. XM_003891449.5 → XP_003891498.1  tRNA selenocysteine 1-associated protein 1 isoform X1

    See identical proteins and their annotated locations for XP_003891498.1

    UniProtKB/TrEMBL
    A0A096MLY3
    Related
    ENSPANP00000000587.1, ENSPANT00000028816.3
    Conserved Domains (2) summary
    cd12610
    Location:4 → 87
    RRM1_SECp43; RNA recognition motif 1 in tRNA selenocysteine-associated protein 1 (SECp43)
    cd12612
    Location:95 → 176
    RRM2_SECp43; RNA recognition motif 2 in tRNA selenocysteine-associated protein 1 (SECp43)

  3. XM_009203199.3 → XP_009201463.1  tRNA selenocysteine 1-associated protein 1 isoform X2

    See identical proteins and their annotated locations for XP_009201463.1

    Conserved Domains (2) summary
    cd12610
    Location:1 → 74
    RRM1_SECp43; RNA recognition motif 1 in tRNA selenocysteine-associated protein 1 (SECp43)
    cd12612
    Location:82 → 163
    RRM2_SECp43; RNA recognition motif 2 in tRNA selenocysteine-associated protein 1 (SECp43)

  4. XM_021938453.2 → XP_021794145.1  tRNA selenocysteine 1-associated protein 1 isoform X4

    Conserved Domains (1) summary
    cd12612
    Location:41 → 122
    RRM2_SECp43; RNA recognition motif 2 in tRNA selenocysteine-associated protein 1 (SECp43)
Nucleotide Protein
Heading Accession and Version

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