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RB1CC1 RB1 inducible coiled-coil 1 [ Papio anubis (olive baboon) ]

Gene ID: 101009883, updated on 8-Mar-2024

Summary

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Gene symbol
RB1CC1
Gene description
RB1 inducible coiled-coil 1
See related
Ensembl:ENSPANG00000020227
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
26
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 8 NC_044983.1 (48178997..48274580, complement)
103 previous assembly Panu_3.0 (GCF_000264685.3) 8 NC_018159.2 (48856390..48951143, complement)

Chromosome 8 - NC_044983.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108587445 Neighboring gene ALK and LTK ligand 1 Neighboring gene serine/threonine-protein kinase WNK2-like Neighboring gene hsc70-interacting protein pseudogene Neighboring gene neuropeptides B and W receptor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables molecular adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagy of mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagy of peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in piecemeal microautophagy of the nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in reticulophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Atg1/ULK1 kinase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extrinsic component of membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in phagophore assembly site membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RB1-inducible coiled-coil protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044983.1 Reference Panubis1.0 Primary Assembly

    Range
    48178997..48274580 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003902738.4 → XP_003902787.1  RB1-inducible coiled-coil protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A2I3MSA7, A0A8I5NPP1
    Related
    ENSPANP00000038658.2, ENSPANT00000033426.2
    Conserved Domains (6) summary
    COG1340
    Location:1000 → 1265
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
    pfam10377
    Location:1439 → 1588
    ATG11; Autophagy-related protein 11
    pfam15665
    Location:858 → 1047
    FAM184; Family with sequence similarity 184, A and B
    cl00155
    Location:3 → 77
    UBQ; Ubiquitin-like proteins
    cl02488
    Location:886 → 1059
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl23765
    Location:1014 → 1119
    iSH2_PI3K_IA_R; Inter-Src homology 2 (iSH2) helical domain of Class IA Phosphoinositide 3-kinase Regulatory subunits

  2. XM_009213034.3 → XP_009211298.1  RB1-inducible coiled-coil protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8I5NPP1
    Conserved Domains (6) summary
    COG1340
    Location:1000 → 1265
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
    pfam10377
    Location:1439 → 1585
    ATG11; Autophagy-related protein 11
    pfam15665
    Location:858 → 1047
    FAM184; Family with sequence similarity 184, A and B
    cl00155
    Location:3 → 77
    UBQ; Ubiquitin-like proteins
    cl02488
    Location:886 → 1059
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl23765
    Location:1014 → 1119
    iSH2_PI3K_IA_R; Inter-Src homology 2 (iSH2) helical domain of Class IA Phosphoinositide 3-kinase Regulatory subunits

  3. XM_021942316.1 → XP_021798008.1  RB1-inducible coiled-coil protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8I5NPP1
    Conserved Domains (2) summary
    pfam10377
    Location:1323 → 1472
    ATG11; Autophagy-related protein 11
    cl25732
    Location:727 → 1257
    SMC_N; RecF/RecN/SMC N terminal domain

  4. XM_009213035.3 → XP_009211299.1  RB1-inducible coiled-coil protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A096N537
    Conserved Domains (5) summary
    COG1340
    Location:1000 → 1265
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
    pfam15665
    Location:858 → 1047
    FAM184; Family with sequence similarity 184, A and B
    cl00155
    Location:3 → 77
    UBQ; Ubiquitin-like proteins
    cl02488
    Location:886 → 1059
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl23765
    Location:1014 → 1119
    iSH2_PI3K_IA_R; Inter-Src homology 2 (iSH2) helical domain of Class IA Phosphoinositide 3-kinase Regulatory subunits
Nucleotide Protein
Heading Accession and Version

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