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LOC101004442 probable histone-lysine N-methyltransferase PRDM7 [ Papio anubis (olive baboon) ]

Gene ID: 101004442, updated on 25-Jan-2024

Summary

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Gene symbol
LOC101004442
Gene description
probable histone-lysine N-methyltransferase PRDM7
See related
Ensembl:ENSPANG00000013143
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Also known as
PRDM9
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Genomic context

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Location:
chromosome: 5
Exon count:
11
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 5 NC_044980.1 (22785296..22805951)
103 previous assembly Panu_3.0 (GCF_000264685.3) 6 NC_018157.2 (23498039..23520035)

Chromosome 5 - NC_044980.1Genomic Context describing neighboring genes Neighboring gene cadherin 12 Neighboring gene beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase-like Neighboring gene tyrosine-protein phosphatase non-receptor type 11 pseudogene Neighboring gene uncharacterized LOC108586459 Neighboring gene small nucleolar RNA SNORA40

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone H3K36 methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone H3K4 methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables recombination hotspot binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of reciprocal meiotic recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: probable histone-lysine N-methyltransferase PRDM7
Names
PR/SET domain 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044980.1 Reference Panubis1.0 Primary Assembly

    Range
    22785296..22805951
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031666098.1 → XP_031521958.1  LOW QUALITY PROTEIN: probable histone-lysine N-methyltransferase PRDM7

    UniProtKB/TrEMBL
    A0A096N2F8
    Related
    ENSPANP00000006501.3, ENSPANT00000017793.3
    Conserved Domains (3) summary
    pfam09514
    Location:171 → 201
    SSXRD; SSXRD motif
    cd19193
    Location:240 → 351
    PR-SET_PRDM7_9; PR-SET domain found in PR domain zinc finger protein 7 (PRDM7) and 9 (PRDM9) and similar proteins
    cl02581
    Location:27 → 85
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
Nucleotide Protein
Heading Accession and Version

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