U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PDZRN3 PDZ domain containing ring finger 3 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100992980, updated on 3-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
PDZRN3
Gene description
PDZ domain containing ring finger 3
See related
Ensembl:ENSPPAG00000037945
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 2
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 2 NC_085926.1 (73337666..73581399, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 3 NC_073252.1 (73342455..73586188, complement)

Chromosome 2 - NC_085926.1Genomic Context describing neighboring genes Neighboring gene G patch domain-containing protein 11-like Neighboring gene U6 spliceosomal RNA Neighboring gene U7 small nuclear RNA Neighboring gene uncharacterized LOC130541337 Neighboring gene uncharacterized LOC130541338 Neighboring gene heat shock protein HSP 90-beta-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neuromuscular junction development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuromuscular junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
E3 ubiquitin-protein ligase PDZRN3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_085926.1 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    73337666..73581399 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024928360.4 → XP_024784128.3  E3 ubiquitin-protein ligase PDZRN3 isoform X1

  2. XM_063602826.1 → XP_063458896.1  E3 ubiquitin-protein ligase PDZRN3 isoform X3

  3. XM_034956900.3 → XP_034812791.2  E3 ubiquitin-protein ligase PDZRN3 isoform X3

  4. XM_034956901.3 → XP_034812792.2  E3 ubiquitin-protein ligase PDZRN3 isoform X4

  5. XM_034956898.3 → XP_034812789.2  E3 ubiquitin-protein ligase PDZRN3 isoform X2

    UniProtKB/TrEMBL
    A0A2R9BN49
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.