U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SCN9A sodium voltage-gated channel alpha subunit 9 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100988842, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
SCN9A
Gene description
sodium voltage-gated channel alpha subunit 9
See related
Ensembl:ENSPPAG00000034120
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 13
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 13 NC_073262.2 (68850849..69028376, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 2B NC_073251.1 (68865826..69043323, complement)

Chromosome 13 - NC_073262.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC130541284 Neighboring gene tetratricopeptide repeat domain 21B Neighboring gene sodium voltage-gated channel alpha subunit 1 Neighboring gene uncharacterized LOC103787066 Neighboring gene small nucleolar RNA U13 Neighboring gene sodium voltage-gated channel alpha subunit 7 Neighboring gene xin actin binding repeat containing 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables voltage-gated sodium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane depolarization during action potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuronal action potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of voltage-gated sodium channel complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
sodium channel protein type 9 subunit alpha
Names
sodium channel, voltage-gated, type IX, alpha subunit

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073262.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    68850849..69028376 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055108703.2 → XP_054964678.1  sodium channel protein type 9 subunit alpha isoform X3

  2. XM_055108702.2 → XP_054964677.1  sodium channel protein type 9 subunit alpha isoform X2

  3. XM_055108701.2 → XP_054964676.1  sodium channel protein type 9 subunit alpha isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.