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CTNNA2 catenin alpha 2 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100988691, updated on 11-Mar-2024

Summary

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Gene symbol
CTNNA2
Gene description
catenin alpha 2
See related
Ensembl:ENSPPAG00000040375
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See CTNNA2 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 12 NC_073261.2 (45694150..46845852, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 2A NC_073250.1 (45696905..46848605, complement)

Chromosome 12 - NC_073261.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC130541255 Neighboring gene ankyrin repeat domain-containing protein 11-like Neighboring gene RNA-binding protein 7-like Neighboring gene leucine rich repeat transmembrane neuronal 1 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC117979195 Neighboring gene U7 small nuclear RNA Neighboring gene regenerating islet-derived protein 3-alpha

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables beta-catenin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of catenin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
catenin alpha-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073261.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    45694150..46845852 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014343874.4 → XP_014199360.1  catenin alpha-2 isoform X1

    UniProtKB/TrEMBL
    A0A2R9BZX4
    Related
    ENSPPAP00000035228.1
    Conserved Domains (1) summary
    pfam01044
    Location:81 → 914
    Vinculin; Vinculin family

  2. XM_003816600.4 → XP_003816648.1  catenin alpha-2 isoform X3

    See identical proteins and their annotated locations for XP_003816648.1

    UniProtKB/TrEMBL
    A0A2R9C0I6
    Related
    ENSPPAP00000035236.1
    Conserved Domains (1) summary
    pfam01044
    Location:81 → 821
    Vinculin; Vinculin family

  3. XM_003816599.3 → XP_003816647.1  catenin alpha-2 isoform X2

    See identical proteins and their annotated locations for XP_003816647.1

    UniProtKB/TrEMBL
    A0A2R9CA35
    Related
    ENSPPAP00000035234.1
    Conserved Domains (1) summary
    pfam01044
    Location:81 → 866
    Vinculin; Vinculin family

  4. XM_008969646.4 → XP_008967894.1  catenin alpha-2 isoform X1

    See identical proteins and their annotated locations for XP_008967894.1

    UniProtKB/TrEMBL
    A0A2R9BZX4
    Conserved Domains (1) summary
    pfam01044
    Location:81 → 914
    Vinculin; Vinculin family

  5. XM_034953441.3 → XP_034809332.1  catenin alpha-2 isoform X4

    UniProtKB/TrEMBL
    A0A2R9C0J7
    Conserved Domains (1) summary
    pfam01044
    Location:16 → 577
    Vinculin; Vinculin family

  6. XM_034953442.2 → XP_034809333.1  catenin alpha-2 isoform X5

    UniProtKB/TrEMBL
    A0A2R9C0J7
    Conserved Domains (1) summary
    pfam01044
    Location:1 → 546
    Vinculin; Vinculin family
Nucleotide Protein
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