U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CFAP52 cilia and flagella associated protein 52 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100983643, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
CFAP52
Gene description
cilia and flagella associated protein 52
See related
Ensembl:ENSPPAG00000034715
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
WDR16
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 19
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 19 NC_073268.2 (64107600..64169961, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 17 NC_073266.1 (68917243..68979767, complement)

Chromosome 19 - NC_073268.2Genomic Context describing neighboring genes Neighboring gene dehydrogenase/reductase 7C Neighboring gene ubiquitin specific peptidase 43 Neighboring gene large ribosomal subunit protein eL19-like Neighboring gene syntaxin 8 Neighboring gene uncharacterized LOC134729518 Neighboring gene uncharacterized LOC134729516 Neighboring gene netrin 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
cilia- and flagella-associated protein 52
Names
WD repeat domain 16

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073268.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    64107600..64169961 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034942386.3 → XP_034798277.1  cilia- and flagella-associated protein 52 isoform X2

    UniProtKB/TrEMBL
    A0A2R9B4K1
    Conserved Domains (3) summary
    smart00320
    Location:127 → 168
    WD40; WD40 repeats
    sd00039
    Location:321 → 357
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:291 → 559
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_003818087.4 → XP_003818135.2  cilia- and flagella-associated protein 52 isoform X1

    UniProtKB/TrEMBL
    A0A2R9B4K1
    Conserved Domains (3) summary
    COG2319
    Location:1 → 432
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:447 → 486
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:373 → 642
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  3. XM_034942387.3 → XP_034798278.1  cilia- and flagella-associated protein 52 isoform X3

    UniProtKB/TrEMBL
    A0A2R9B259
    Conserved Domains (3) summary
    COG2319
    Location:4 → 316
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:331 → 370
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:257 → 526
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.