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MDC1 mediator of DNA damage checkpoint 1 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100981008, updated on 8-Mar-2024

Summary

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Gene symbol
MDC1
Gene description
mediator of DNA damage checkpoint 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See MDC1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 5 NC_073254.2 (45260018..45278434, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 6 NC_073255.1 (41223716..41241276, complement)

Chromosome 5 - NC_073254.2Genomic Context describing neighboring genes Neighboring gene nurim Neighboring gene large ribosomal subunit protein uL30-like Neighboring gene tubulin beta class I Neighboring gene flotillin 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mediator of DNA damage checkpoint protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073254.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    45260018..45278434 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034961705.3 → XP_034817596.2  mediator of DNA damage checkpoint protein 1 isoform X2

  2. XM_063604780.1 → XP_063460850.1  mediator of DNA damage checkpoint protein 1 isoform X2

  3. XM_034961704.3 → XP_034817595.2  mediator of DNA damage checkpoint protein 1 isoform X1

  4. XM_034961702.3 → XP_034817593.2  mediator of DNA damage checkpoint protein 1 isoform X1

  5. XM_034961708.3 → XP_034817599.2  mediator of DNA damage checkpoint protein 1 isoform X4

  6. XM_034961707.3 → XP_034817598.2  mediator of DNA damage checkpoint protein 1 isoform X3

  7. XM_034961703.3 → XP_034817594.2  mediator of DNA damage checkpoint protein 1 isoform X1

  8. XM_055113360.2 → XP_054969335.2  mediator of DNA damage checkpoint protein 1 isoform X4

  9. XM_055113357.2 → XP_054969332.2  mediator of DNA damage checkpoint protein 1 isoform X3

  10. XM_055113352.2 → XP_054969327.2  mediator of DNA damage checkpoint protein 1 isoform X2

  11. XM_063604781.1 → XP_063460851.1  mediator of DNA damage checkpoint protein 1 isoform X3

  12. XM_063604779.1 → XP_063460849.1  mediator of DNA damage checkpoint protein 1 isoform X1

Nucleotide Protein
Heading Accession and Version

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