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CABIN1 calcineurin binding protein 1 [ Otolemur garnettii (small-eared galago) ]

Gene ID: 100958683, updated on 8-Mar-2024

Summary

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Gene symbol
CABIN1
Gene description
calcineurin binding protein 1
See related
Ensembl:ENSOGAG00000005626
Gene type
protein coding
RefSeq status
MODEL
Organism
Otolemur garnettii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
37
Annotation release Status Assembly Chr Location
102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852687.1 (717200..889922)

NW_003852687.1Genomic Context describing neighboring genes Neighboring gene glutathione S-transferase theta-3-like Neighboring gene D-dopachrome tautomerase Neighboring gene U6 spliceosomal RNA Neighboring gene sushi domain containing 2 Neighboring gene L-lactate dehydrogenase B chain pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003852687 Unplaced Scaffold Reference OtoGar3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calcineurin-binding protein cabin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OtoGar3

Genomic

  1. NW_003852687.1 Reference OtoGar3

    Range
    717200..889922
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023508926.1 → XP_023364694.1  calcineurin-binding protein cabin-1

    UniProtKB/TrEMBL
    H0WSH5
    Related
    ENSOGAP00000005036.2, ENSOGAT00000005638.2
    Conserved Domains (4) summary
    COG0457
    Location:34 → 209
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    cd13839
    Location:2120 → 2154
    MEF2_binding; Mycocyte enhancer factor-2 (MEF2) binding domain of the calcineurin-binding protein cabin-1
    sd00006
    Location:90 → 118
    TPR; TPR repeat [structural motif]
    cl26464
    Location:1698 → 2121
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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