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ZCCHC17 zinc finger CCHC-type containing 17 [ Otolemur garnettii (small-eared galago) ]

Gene ID: 100943087, updated on 8-Mar-2024

Summary

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Gene symbol
ZCCHC17
Gene description
zinc finger CCHC-type containing 17
See related
Ensembl:ENSOGAG00000013749
Gene type
protein coding
RefSeq status
MODEL
Organism
Otolemur garnettii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
Orthologs
human mouse all
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Genomic context

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See ZCCHC17 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852579.1 (619624..684268, complement)

NW_003852579.1Genomic Context describing neighboring genes Neighboring gene phosphoglycerate mutase 1 Neighboring gene fatty acid binding protein 3 Neighboring gene small nuclear ribonucleoprotein U5 subunit 40 Neighboring gene U7 small nuclear RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003852579 Unplaced Scaffold Reference OtoGar3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA stabilization IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nucleolar protein of 40 kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OtoGar3

Genomic

  1. NW_003852579.1 Reference OtoGar3

    Range
    619624..684268 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003800755.3 → XP_003800803.1  nucleolar protein of 40 kDa isoform X2

    UniProtKB/TrEMBL
    H0X9R4
    Related
    ENSOGAP00000012321.2, ENSOGAT00000013754.2
    Conserved Domains (1) summary
    cd05686
    Location:13 → 86
    S1_pNO40; S1_pNO40: pNO40 , S1-like RNA-binding domain. pNO40 is a nucleolar protein of unknown function with an N-terminal S1 RNA binding domain, a CCHC type zinc finger, and clusters of basic amino acids representing a potential nucleolar targeting signal. ...

  2. XM_023507458.1 → XP_023363226.1  nucleolar protein of 40 kDa isoform X3

    Conserved Domains (1) summary
    cd05686
    Location:13 → 86
    S1_pNO40; pNO40 , S1-like RNA-binding domain. pNO40 is a nucleolar protein of unknown function with an N-terminal S1 RNA binding domain, a CCHC type zinc finger, and clusters of basic amino acids representing a potential nucleolar targeting signal. pNO40 was ...

  3. XM_023507457.1 → XP_023363225.1  nucleolar protein of 40 kDa isoform X1

    Conserved Domains (1) summary
    cd05686
    Location:13 → 86
    S1_pNO40; pNO40 , S1-like RNA-binding domain. pNO40 is a nucleolar protein of unknown function with an N-terminal S1 RNA binding domain, a CCHC type zinc finger, and clusters of basic amino acids representing a potential nucleolar targeting signal. pNO40 was ...
Nucleotide Protein
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