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POU2F1 POU class 2 homeobox 1 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100935137, updated on 8-Mar-2024

Summary

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Gene symbol
POU2F1
Gene description
POU class 2 homeobox 1
See related
Ensembl:ENSSHAG00000018562
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
18
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 4 NC_045429.1 (54976982..55198244)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 4 Unlocalized Scaffold NW_003838759.1 (3735968..3948433)

Chromosome 4 - NC_045429.1Genomic Context describing neighboring genes Neighboring gene glycoprotein A33 Neighboring gene serine/threonine/tyrosine interacting like 2 Neighboring gene CD247 molecule Neighboring gene cellular repressor of E1A stimulated genes 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
POU domain, class 2, transcription factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045429.1 Reference mSarHar1.11 Primary Assembly

    Range
    54976982..55198244
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031936828.1 → XP_031792688.1  POU domain, class 2, transcription factor 1 isoform X1

    UniProtKB/TrEMBL
    G3X2M6
    Related
    ENSSHAP00000021932.2, ENSSHAT00000022108.2
    Conserved Domains (2) summary
    smart00352
    Location:300 → 374
    POU; Found in Pit-Oct-Unc transcription factors
    pfam00046
    Location:404 → 458
    Homeobox; Homeobox domain

  2. XM_031936831.1 → XP_031792691.1  POU domain, class 2, transcription factor 1 isoform X3

    UniProtKB/TrEMBL
    G3X2M6
    Related
    ENSSHAP00000021931.2, ENSSHAT00000022107.2
    Conserved Domains (2) summary
    smart00352
    Location:282 → 356
    POU; Found in Pit-Oct-Unc transcription factors
    pfam00046
    Location:386 → 440
    Homeobox; Homeobox domain

  3. XM_031936830.1 → XP_031792690.1  POU domain, class 2, transcription factor 1 isoform X2

    UniProtKB/TrEMBL
    A0A7N4PQF3, G3X2M6
    Related
    ENSSHAP00000040922.1, ENSSHAT00000048772.1
    Conserved Domains (2) summary
    smart00352
    Location:289 → 363
    POU; Found in Pit-Oct-Unc transcription factors
    pfam00046
    Location:393 → 447
    Homeobox; Homeobox domain
Nucleotide Protein
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