U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100930371, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
SMUG1
Gene description
single-strand-selective monofunctional uracil-DNA glycosylase 1
See related
Ensembl:ENSSHAG00000028269
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 5
Exon count:
5
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 5 NC_045430.1 (152773230..152779044, complement)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 5 Unlocalized Scaffold NW_003843651.1 (903248..909839, complement)

Chromosome 5 - NC_045430.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene patatin like phospholipase domain containing 8 Neighboring gene THAP domain containing 5 Neighboring gene DnaJ heat shock protein family (Hsp40) member B9

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-strand selective uracil DNA N-glycosylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in base-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
single-strand selective monofunctional uracil DNA glycosylase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045430.1 Reference mSarHar1.11 Primary Assembly

    Range
    152773230..152779044 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031938812.1 → XP_031794672.1  single-strand selective monofunctional uracil DNA glycosylase isoform X2

    UniProtKB/TrEMBL
    A0A7N4NVN5, A0A7N4V166
    Related
    ENSSHAP00000029146.1, ENSSHAT00000030647.1

  2. XM_003771512.4 → XP_003771560.2  single-strand selective monofunctional uracil DNA glycosylase isoform X1

    UniProtKB/TrEMBL
    A0A7N4V166
    Related
    ENSSHAP00000031602.1, ENSSHAT00000038657.1
    Conserved Domains (1) summary
    cd10029
    Location:66 → 299
    UDG_F3_SMUG; SMUG: single-strand-selective monofunctional uracil-DNA glycosylase

  3. XM_023504779.2 → XP_023360547.1  single-strand selective monofunctional uracil DNA glycosylase isoform X3

    Conserved Domains (1) summary
    cl00483
    Location:3 → 169
    UDG_like; Uracil-DNA glycosylases (UDG) and related enzymes
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.