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IST1 IST1 factor associated with ESCRT-III [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100927899, updated on 8-Mar-2024

Summary

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Gene symbol
IST1
Gene description
IST1 factor associated with ESCRT-III
See related
Ensembl:ENSSHAG00000022958
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
10
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 2 NC_045427.1 (41031420..41054314)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 1 Unlocalized Scaffold NW_003816780.1 (2520076..2541698, complement)

Chromosome 2 - NC_045427.1Genomic Context describing neighboring genes Neighboring gene ataxin 1 like Neighboring gene zinc finger protein 821 Neighboring gene polycystin 1 like 3, transient receptor potential channel interacting Neighboring gene uncharacterized LOC116421289 Neighboring gene uncharacterized LOC116421290

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
IST1 homolog
Names
IST1, ESCRT-III associated factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045427.1 Reference mSarHar1.11 Primary Assembly

    Range
    41031420..41054314
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012540420.3 → XP_012395874.1  IST1 homolog isoform X1

    UniProtKB/TrEMBL
    A0A7N4NRF6, A0A7N4NWC9
    Related
    ENSSHAP00000028772.1, ENSSHAT00000037076.1
    Conserved Domains (1) summary
    pfam03398
    Location:13 → 176
    Ist1; Regulator of Vps4 activity in the MVB pathway

  2. XM_012540421.3 → XP_012395875.1  IST1 homolog isoform X2

    UniProtKB/TrEMBL
    A0A7N4NRF6
    Conserved Domains (1) summary
    pfam03398
    Location:13 → 176
    Ist1; Regulator of Vps4 activity in the MVB pathway
Nucleotide Protein
Heading Accession and Version

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