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HOMEZ homeobox and leucine zipper encoding [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100925299, updated on 8-Mar-2024

Summary

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Gene symbol
HOMEZ
Gene description
homeobox and leucine zipper encoding
See related
Ensembl:ENSSHAG00000031837
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
4
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 2 NC_045427.1 (494338936..494349256, complement)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 1 Unlocalized Scaffold NW_003816506.1 (1566784..1577485, complement)

Chromosome 2 - NC_045427.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 7 member 8 Neighboring gene ring finger protein 212B Neighboring gene polyadenylate-binding protein 2 Neighboring gene protein phosphatase 1 regulatory subunit 3E Neighboring gene solute carrier family 22 member 17

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox and leucine zipper protein Homez

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045427.1 Reference mSarHar1.11 Primary Assembly

    Range
    494338936..494349256 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003755839.2 → XP_003755887.1  homeobox and leucine zipper protein Homez isoform X2

    UniProtKB/TrEMBL
    G3WPK3
    Related
    ENSSHAP00000017358.1, ENSSHAT00000017503.2
    Conserved Domains (2) summary
    cd00086
    Location:358 → 415
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam11569
    Location:462 → 508
    Homez; Homeodomain leucine-zipper encoding, Homez

  2. XM_031955043.1 → XP_031810903.1  homeobox and leucine zipper protein Homez isoform X3

    UniProtKB/TrEMBL
    A0A7N4V421
    Related
    ENSSHAP00000037139.1, ENSSHAT00000048902.1
    Conserved Domains (2) summary
    cd00086
    Location:332 → 389
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam11569
    Location:436 → 482
    Homez; Homeodomain leucine-zipper encoding, Homez

  3. XM_012544724.3 → XP_012400178.2  homeobox and leucine zipper protein Homez isoform X1

    Conserved Domains (2) summary
    cd00086
    Location:460 → 517
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam11569
    Location:564 → 610
    Homez; Homeodomain leucine-zipper encoding, Homez
Nucleotide Protein
Heading Accession and Version

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