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LOC100924119 aldehyde oxidase 4-like [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100924119, updated on 9-Nov-2023

Summary

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Gene symbol
LOC100924119
Gene description
aldehyde oxidase 4-like
See related
Ensembl:ENSSHAG00000016877
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
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Genomic context

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See LOC100924119 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
35
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 3 NC_045428.1 (365553872..365638791, complement)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 3 Unlocalized Scaffold NW_003831663.1 (2391586..2478819)

Chromosome 3 - NC_045428.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor 8D1-like Neighboring gene putative olfactory receptor 8G3 pseudogene Neighboring gene aldehyde oxidase 3-like Neighboring gene aldehyde oxidase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 2 iron, 2 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: aldehyde oxidase 4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045428.1 Reference mSarHar1.11 Primary Assembly

    Range
    365553872..365638791 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012544914.2 → XP_012400368.1  LOW QUALITY PROTEIN: aldehyde oxidase 4-like

    UniProtKB/TrEMBL
    G3WWT1
    Related
    ENSSHAP00000019886.2, ENSSHAT00000020043.2
    Conserved Domains (6) summary
    TIGR02969
    Location:12 → 1345
    mam_aldehyde_ox; aldehyde oxidase
    pfam00941
    Location:253 → 430
    FAD_binding_5; FAD binding domain in molybdopterin dehydrogenase
    pfam01315
    Location:607 → 710
    Ald_Xan_dh_C; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
    pfam01799
    Location:93 → 164
    Fer2_2; [2Fe-2S] binding domain
    pfam02738
    Location:724 → 1253
    Ald_Xan_dh_C2; Molybdopterin-binding domain of aldehyde dehydrogenase
    pfam03450
    Location:439 → 543
    CO_deh_flav_C; CO dehydrogenase flavoprotein C-terminal domain
Nucleotide Protein
Heading Accession and Version

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