U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

JUP junction plakoglobin [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100923958, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
JUP
Gene description
junction plakoglobin
See related
Ensembl:ENSSHAG00000004334
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 4
Exon count:
16
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 4 NC_045429.1 (337200835..337232697, complement)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 4 Unlocalized Scaffold NW_003838835.1 (82704..114848)

Chromosome 4 - NC_045429.1Genomic Context describing neighboring genes Neighboring gene gastrin Neighboring gene huntingtin associated protein 1 Neighboring gene prolyl 3-hydroxylase family member 4 (inactive) Neighboring gene FKBP prolyl isomerase 10

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-catenin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein phosphatase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of catenin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
junction plakoglobin

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045429.1 Reference mSarHar1.11 Primary Assembly

    Range
    337200835..337232697 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031966260.1 → XP_031822120.1  junction plakoglobin

    UniProtKB/TrEMBL
    G3VP42
    Conserved Domains (4) summary
    smart00185
    Location:310 → 350
    ARM; Armadillo/beta-catenin-like repeats
    PLN03200
    Location:297 → 627
    PLN03200; cellulose synthase-interactive protein; Provisional
    sd00043
    Location:362 → 387
    ARM; armadillo repeat [structural motif]
    pfam00514
    Location:190 → 222
    Arm; Armadillo/beta-catenin-like repeat

  2. XM_031966259.1 → XP_031822119.1  junction plakoglobin

    UniProtKB/TrEMBL
    G3VP42
    Conserved Domains (4) summary
    smart00185
    Location:310 → 350
    ARM; Armadillo/beta-catenin-like repeats
    PLN03200
    Location:297 → 627
    PLN03200; cellulose synthase-interactive protein; Provisional
    sd00043
    Location:362 → 387
    ARM; armadillo repeat [structural motif]
    pfam00514
    Location:190 → 222
    Arm; Armadillo/beta-catenin-like repeat

  3. XM_031966261.1 → XP_031822121.1  junction plakoglobin

    UniProtKB/TrEMBL
    G3VP42
    Related
    ENSSHAP00000004947.2, ENSSHAT00000004996.2
    Conserved Domains (4) summary
    smart00185
    Location:310 → 350
    ARM; Armadillo/beta-catenin-like repeats
    PLN03200
    Location:297 → 627
    PLN03200; cellulose synthase-interactive protein; Provisional
    sd00043
    Location:362 → 387
    ARM; armadillo repeat [structural motif]
    pfam00514
    Location:190 → 222
    Arm; Armadillo/beta-catenin-like repeat

  4. XM_031966262.1 → XP_031822122.1  junction plakoglobin

    UniProtKB/TrEMBL
    G3VP42
    Conserved Domains (4) summary
    smart00185
    Location:310 → 350
    ARM; Armadillo/beta-catenin-like repeats
    PLN03200
    Location:297 → 627
    PLN03200; cellulose synthase-interactive protein; Provisional
    sd00043
    Location:362 → 387
    ARM; armadillo repeat [structural motif]
    pfam00514
    Location:190 → 222
    Arm; Armadillo/beta-catenin-like repeat
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.