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MSI2 musashi RNA binding protein 2 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100921430, updated on 8-Mar-2024

Summary

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Gene symbol
MSI2
Gene description
musashi RNA binding protein 2
See related
Ensembl:ENSSHAG00000008672
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
16
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 4 NC_045429.1 (347884304..348405465)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 4 Unlocalized Scaffold NW_003838825.1 (441429..975674, complement)

Chromosome 4 - NC_045429.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116423708 Neighboring gene 40S ribosomal protein S24 pseudogene Neighboring gene uncharacterized LOC116423322 Neighboring gene coiled-coil domain containing 182 Neighboring gene mitochondrial ribosomal protein S23

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA-binding protein Musashi homolog 2
Names
musashi homolog 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045429.1 Reference mSarHar1.11 Primary Assembly

    Range
    347884304..348405465
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031966452.1 → XP_031822312.1  RNA-binding protein Musashi homolog 2 isoform X6

    Conserved Domains (3) summary
    TIGR01628
    Location:13 → 348
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:89 → 162
    RRM2_MSI; RNA recognition motif 2 (RRM2) found in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cl17169
    Location:1 → 87
    RRM_SF; RNA recognition motif (RRM) superfamily

  2. XM_031966449.1 → XP_031822309.1  RNA-binding protein Musashi homolog 2 isoform X2

    Conserved Domains (3) summary
    TIGR01628
    Location:35 → 358
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:111 → 184
    RRM2_MSI; RNA recognition motif 2 (RRM2) found in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12760
    Location:17 → 109
    RRM1_MSI2; RNA recognition motif 1 (RRM1) found in RNA-binding protein Musashi homolog 2 (Musashi-2 ) and similar proteins

  3. XM_031966447.1 → XP_031822307.1  RNA-binding protein Musashi homolog 2 isoform X1

    Conserved Domains (3) summary
    TIGR01628
    Location:35 → 370
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:111 → 184
    RRM2_MSI; RNA recognition motif 2 (RRM2) found in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12760
    Location:17 → 109
    RRM1_MSI2; RNA recognition motif 1 (RRM1) found in RNA-binding protein Musashi homolog 2 (Musashi-2 ) and similar proteins

  4. XM_031966450.1 → XP_031822310.1  RNA-binding protein Musashi homolog 2 isoform X4

    Conserved Domains (3) summary
    TIGR01628
    Location:35 → 352
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:111 → 184
    RRM2_MSI; RNA recognition motif 2 (RRM2) found in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12760
    Location:17 → 109
    RRM1_MSI2; RNA recognition motif 1 (RRM1) found in RNA-binding protein Musashi homolog 2 (Musashi-2 ) and similar proteins

  5. XM_031966451.1 → XP_031822311.1  RNA-binding protein Musashi homolog 2 isoform X5

    Conserved Domains (3) summary
    TIGR01628
    Location:35 → 351
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:111 → 184
    RRM2_MSI; RNA recognition motif 2 (RRM2) found in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12760
    Location:17 → 109
    RRM1_MSI2; RNA recognition motif 1 (RRM1) found in RNA-binding protein Musashi homolog 2 (Musashi-2 ) and similar proteins

  6. XM_031966454.1 → XP_031822314.1  RNA-binding protein Musashi homolog 2 isoform X9

    Conserved Domains (3) summary
    TIGR01628
    Location:35 → 333
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:111 → 184
    RRM2_MSI; RNA recognition motif 2 (RRM2) found in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12760
    Location:17 → 109
    RRM1_MSI2; RNA recognition motif 1 (RRM1) found in RNA-binding protein Musashi homolog 2 (Musashi-2 ) and similar proteins

  7. XM_023502150.2 → XP_023357918.2  RNA-binding protein Musashi homolog 2 isoform X3

    UniProtKB/TrEMBL
    A0A7N4PLL6
    Related
    ENSSHAP00000039221.1, ENSSHAT00000037324.1
    Conserved Domains (3) summary
    TIGR01628
    Location:35 → 362
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:111 → 184
    RRM2_MSI; RNA recognition motif 2 (RRM2) found in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12760
    Location:17 → 109
    RRM1_MSI2; RNA recognition motif 1 (RRM1) found in RNA-binding protein Musashi homolog 2 (Musashi-2 ) and similar proteins

  8. XM_031966453.1 → XP_031822313.1  RNA-binding protein Musashi homolog 2 isoform X8

    Conserved Domains (2) summary
    cd12323
    Location:111 → 184
    RRM2_MSI; RNA recognition motif 2 (RRM2) found in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12760
    Location:17 → 109
    RRM1_MSI2; RNA recognition motif 1 (RRM1) found in RNA-binding protein Musashi homolog 2 (Musashi-2 ) and similar proteins

  9. XM_023502155.2 → XP_023357923.2  RNA-binding protein Musashi homolog 2 isoform X10

    Conserved Domains (2) summary
    cd12323
    Location:111 → 184
    RRM2_MSI; RNA recognition motif 2 (RRM2) found in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12760
    Location:17 → 109
    RRM1_MSI2; RNA recognition motif 1 (RRM1) found in RNA-binding protein Musashi homolog 2 (Musashi-2 ) and similar proteins

  10. XM_023502153.2 → XP_023357921.2  RNA-binding protein Musashi homolog 2 isoform X7

    UniProtKB/TrEMBL
    G3W3M2
    Related
    ENSSHAP00000010027.2, ENSSHAT00000010115.2
    Conserved Domains (3) summary
    TIGR01628
    Location:35 → 343
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:111 → 184
    RRM2_MSI; RNA recognition motif 2 (RRM2) found in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12760
    Location:17 → 109
    RRM1_MSI2; RNA recognition motif 1 (RRM1) found in RNA-binding protein Musashi homolog 2 (Musashi-2 ) and similar proteins
Nucleotide Protein
Heading Accession and Version

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