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NLRX1 NLR family member X1 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100921418, updated on 8-Mar-2024

Summary

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Gene symbol
NLRX1
Gene description
NLR family member X1
See related
Ensembl:ENSSHAG00000009158
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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See NLRX1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
13
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 3 NC_045428.1 (358925299..358953004)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 3 Unlocalized Scaffold NW_003831667.1 (510508..538134, complement)

Chromosome 3 - NC_045428.1Genomic Context describing neighboring genes Neighboring gene histone H4 transcription factor Neighboring gene ATP binding cassette subfamily G member 4 Neighboring gene NHERF family PDZ scaffold protein 4 Neighboring gene dynein regulatory complex subunit 12 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NLR family member X1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045428.1 Reference mSarHar1.11 Primary Assembly

    Range
    358925299..358953004
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023499409.2 → XP_023355177.1  NLR family member X1

    UniProtKB/TrEMBL
    G3W5A8
    Related
    ENSSHAP00000010613.1, ENSSHAT00000010706.2
    Conserved Domains (3) summary
    sd00033
    Location:698 → 726
    LRR_RI; leucine-rich repeat [structural motif]
    cl21455
    Location:161 → 320
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    cl26161
    Location:698 → 885
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

  2. XM_023499410.2 → XP_023355178.1  NLR family member X1

    UniProtKB/TrEMBL
    G3W5A8
    Conserved Domains (3) summary
    sd00033
    Location:698 → 726
    LRR_RI; leucine-rich repeat [structural motif]
    cl21455
    Location:161 → 320
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    cl26161
    Location:698 → 885
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

  3. XM_012544958.3 → XP_012400412.1  NLR family member X1

    UniProtKB/TrEMBL
    G3W5A8
    Conserved Domains (3) summary
    sd00033
    Location:698 → 726
    LRR_RI; leucine-rich repeat [structural motif]
    cl21455
    Location:161 → 320
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    cl26161
    Location:698 → 885
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
Nucleotide Protein
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