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SRSF1 serine and arginine rich splicing factor 1 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100919859, updated on 8-Mar-2024

Summary

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Gene symbol
SRSF1
Gene description
serine and arginine rich splicing factor 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
5
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 4 NC_045429.1 (348793795..348798197, complement)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 4 Unlocalized Scaffold NW_003838825.1 (34930..39951)

Chromosome 4 - NC_045429.1Genomic Context describing neighboring genes Neighboring gene CUE domain containing 1 Neighboring gene vascular endothelial zinc finger 1 Neighboring gene dynein light chain LC8-type 2 Neighboring gene olfactory receptor 4D1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/arginine-rich splicing factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045429.1 Reference mSarHar1.11 Primary Assembly

    Range
    348793795..348798197 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003767957.4 → XP_003768005.1  serine/arginine-rich splicing factor 1

    See identical proteins and their annotated locations for XP_003768005.1

    UniProtKB/TrEMBL
    G3VI78
    Conserved Domains (2) summary
    cd12597
    Location:12 → 90
    RRM1_SRSF1; RNA recognition motif 1 (RRM1) found in serine/arginine-rich splicing factor 1 (SRSF1) and similar proteins
    cd12767
    Location:114 → 197
    RRM2_SRSF1; RNA recognition motif 2 (RRM2) found in serine/arginine-rich splicing factor 1 (SRSF1) and similar proteins

RNA

  1. XR_001120968.3 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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