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PLAA phospholipase A2 activating protein [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100918529, updated on 8-Mar-2024

Summary

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Gene symbol
PLAA
Gene description
phospholipase A2 activating protein
See related
Ensembl:ENSSHAG00000005541
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
15
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 1 NC_045426.1 (284394314..284433157)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 2 Unlocalized Scaffold NW_003823499.1 (165238..203479, complement)

Chromosome 1 - NC_045426.1Genomic Context describing neighboring genes Neighboring gene TEK receptor tyrosine kinase Neighboring gene intraflagellar transport 74 Neighboring gene leucine rich repeat containing 19 Neighboring gene caspase activity and apoptosis inhibitor 1 Neighboring gene zinc finger and BTB domain-containing protein 38-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin recycling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phospholipase A-2-activating protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045426.1 Reference mSarHar1.11 Primary Assembly

    Range
    284394314..284433157
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031943330.1 → XP_031799190.1  phospholipase A-2-activating protein isoform X1

    UniProtKB/TrEMBL
    A0A7N4NRV8, G3VT62
    Related
    ENSSHAP00000006367.2, ENSSHAT00000006422.2
    Conserved Domains (4) summary
    cd00200
    Location:10 → 297
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:68 → 110
    7WD40; WD40 repeat [structural motif]
    pfam08324
    Location:555 → 808
    PUL; PUL domain
    pfam09070
    Location:346 → 459
    PFU; PFU (PLAA family ubiquitin binding)

  2. XM_003761401.4 → XP_003761449.1  phospholipase A-2-activating protein isoform X2

    UniProtKB/TrEMBL
    A0A7N4NRV8
    Related
    ENSSHAP00000026948.1, ENSSHAT00000046739.1
    Conserved Domains (5) summary
    COG2319
    Location:6 → 296
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:10 → 297
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    pfam08324
    Location:537 → 790
    PUL; PUL domain
    pfam09070
    Location:346 → 459
    PFU; PFU (PLAA family ubiquitin binding)
    sd00039
    Location:68 → 110
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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