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LDLRAD4 low density lipoprotein receptor class A domain containing 4 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100914099, updated on 8-Mar-2024

Summary

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Gene symbol
LDLRAD4
Gene description
low density lipoprotein receptor class A domain containing 4
See related
Ensembl:ENSSHAG00000020545
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Also known as
C2H18orf1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
17
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 1 NC_045426.1 (508695337..509263301)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 2 Unlocalized Scaffold NW_003823328.1 (1102076..1716875)

Chromosome 1 - NC_045426.1Genomic Context describing neighboring genes Neighboring gene SEH1 like nucleoporin Neighboring gene centrosomal protein 192 Neighboring gene family with sequence similarity 210 member A Neighboring gene RNA guanine-7 methyltransferase Neighboring gene melanocortin 5 receptor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables R-SMAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transforming growth factor beta receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in early endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
low-density lipoprotein receptor class A domain-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045426.1 Reference mSarHar1.11 Primary Assembly

    Range
    508695337..509263301
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031946676.1 → XP_031802536.1  low-density lipoprotein receptor class A domain-containing protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A7N4V453, G3WQN6
    Conserved Domains (1) summary
    cd00112
    Location:16 → 47
    LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...

  2. XM_023496263.2 → XP_023352031.1  low-density lipoprotein receptor class A domain-containing protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A7N4V453, G3WQN6
    Related
    ENSSHAP00000037938.1, ENSSHAT00000035258.1
    Conserved Domains (1) summary
    cd00112
    Location:16 → 47
    LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...

  3. XM_031946677.1 → XP_031802537.1  low-density lipoprotein receptor class A domain-containing protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A7N4V453, G3WQN6
    Conserved Domains (1) summary
    cd00112
    Location:16 → 47
    LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...

  4. XM_031946681.1 → XP_031802541.1  low-density lipoprotein receptor class A domain-containing protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A7N4V453, G3WQN6
    Conserved Domains (1) summary
    cd00112
    Location:16 → 47
    LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...

  5. XM_031946679.1 → XP_031802539.1  low-density lipoprotein receptor class A domain-containing protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A7N4V453, G3WQN6
    Conserved Domains (1) summary
    cd00112
    Location:16 → 47
    LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...

  6. XM_031946678.1 → XP_031802538.1  low-density lipoprotein receptor class A domain-containing protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A7N4V453, G3WQN6
    Conserved Domains (1) summary
    cd00112
    Location:16 → 47
    LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...

  7. XM_023496267.2 → XP_023352035.1  low-density lipoprotein receptor class A domain-containing protein 4 isoform X1

    UniProtKB/TrEMBL
    A0A7N4V453, G3WQN6
    Conserved Domains (1) summary
    cd00112
    Location:16 → 47
    LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...

  8. XM_023496269.2 → XP_023352037.1  low-density lipoprotein receptor class A domain-containing protein 4 isoform X3

    UniProtKB/TrEMBL
    A0A7N4PWM9

  9. XM_012541556.3 → XP_012397010.1  low-density lipoprotein receptor class A domain-containing protein 4 isoform X2

    UniProtKB/TrEMBL
    A0A7N4PWM9
    Related
    ENSSHAP00000044566.1, ENSSHAT00000043187.1

  10. XM_012541557.3 → XP_012397011.1  low-density lipoprotein receptor class A domain-containing protein 4 isoform X3

    UniProtKB/TrEMBL
    A0A7N4PWM9
Nucleotide Protein
Heading Accession and Version

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