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vepp1.L ventral pancreatic precursor 1 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 100884156, updated on 11-Apr-2024

Summary

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Official Symbol
vepp1.L
Official Full Name
ventral pancreatic precursor 1 L homeolog
Primary source
Xenbase:XB-GENE-17329840
Locus tag
XELAEV_18011276mg
See related
EnsemblRapid:ENSXLAG00005028694
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
vpp1
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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Location:
chromosome: 2L
Exon count:
4
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2L NC_054373.1 (2506966..2510626)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2L NC_030726.1 (2491501..2495161)

Chromosome 2L - NC_054373.1Genomic Context describing neighboring genes Neighboring gene polymerase (DNA directed), theta L homeolog Neighboring gene F-box protein 40 L homeolog Neighboring gene SID1 transmembrane family member 1 L homeolog Neighboring gene upstream transcription factor family member 3 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Homeoprotein hhex-induced conversion of intestinal to ventral pancreatic precursors results in the formation of giant pancreata in Xenopus embryos. Zhao H, et al. Proc Natl Acad Sci U S A, 2012 May 29. PMID 22592794, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Data show that knockdown of hematopoietically expressed homeobox (hhex) resulted in a down-regulation of ventral pancreatic precursor 1 (vpp1) expression and a specific loss of the ventral pancreas.
    Title: Homeoprotein hhex-induced conversion of intestinal to ventral pancreatic precursors results in the formation of giant pancreata in Xenopus embryos.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by Xenbase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
ventral pancreatic precursor 1 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001258387.1 → NP_001245316.1  ventral pancreatic precursor 1 L homeolog precursor

    See identical proteins and their annotated locations for NP_001245316.1

    Status: PROVISIONAL

    Source sequence(s)
    JF439312
    UniProtKB/TrEMBL
    H9LUN0, H9LUN1
    Related
    ENSXLAP00005085435.1, ENSXLAT00005087097.1
    Conserved Domains (2) summary
    smart00410
    Location:35 → 147
    IG_like; Immunoglobulin like
    cl11960
    Location:158 → 255
    Ig; Immunoglobulin domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054373.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    2506966..2510626
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

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