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RNU6-33P RNA, U6 small nuclear 33, pseudogene [ Homo sapiens (human) ]

Gene ID: 100873748, updated on 10-Oct-2023

Summary

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Official Symbol
RNU6-33Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 33, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:34277
See related
Ensembl:ENSG00000207524 AllianceGenome:HGNC:34277
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RNU6-33
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Genomic context

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Location:
4q22.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (88684848..88684954, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (92016486..92016592, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (89605999..89606105, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene CD53 molecule pseudogene Neighboring gene HECT and RLD domain containing E3 ubiquitin protein ligase 3 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15564 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15565 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15566 Neighboring gene NANOG hESC enhancer GRCh37_chr4:89522262-89522952 Neighboring gene RN7SK pseudogene 244 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:89554901-89555404 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:89555405-89555907 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr4:89585126-89586325 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21717 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:89642061-89642562 Neighboring gene FAM13A antisense RNA 1 Neighboring gene nucleosome assembly protein 1 like 5 Neighboring gene family with sequence similarity 13 member A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043067.1 

    Range
    101..207
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    88684848..88684954 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    92016486..92016592 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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