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FOXP4 forkhead box P4 [ Gallus gallus (chicken) ]

Gene ID: 100858652, updated on 8-Mar-2024

Summary

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Official Symbol
FOXP4provided by CGNC
Official Full Name
forkhead box P4provided by CGNC
Primary source
CGNC:64443
See related
Ensembl:ENSGALG00010027702
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
FOXP4L
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 26
Exon count:
20
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 26 NC_052557.1 (4884446..4927344)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 26 NC_052598.1 (4852644..4895217)

Chromosome 26 - NC_052557.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107055180 Neighboring gene triggering receptor expressed on myeloid cells B1 Neighboring gene triggering receptor expressed on myeloid cells 2 Neighboring gene triggering receptor expressed on myeloid cells B2 Neighboring gene uncharacterized LOC121107638 Neighboring gene MyoD family inhibitor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
forkhead box protein P4
Names
forkhead box protein P4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052557.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    4884446..4927344
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004948413.5 → XP_004948470.2  forkhead box protein P4 isoform X1

    UniProtKB/TrEMBL
    A0A8V1AFE6
    Conserved Domains (2) summary
    smart00339
    Location:454 → 526
    FH; FORKHEAD
    COG5025
    Location:359 → 622
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

  2. XM_046904156.1 → XP_046760112.1  forkhead box protein P4 isoform X3

  3. XM_015298985.4 → XP_015154471.2  forkhead box protein P4 isoform X2

    Conserved Domains (2) summary
    smart00339
    Location:453 → 525
    FH; FORKHEAD
    COG5025
    Location:358 → 621
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

  4. XM_046904157.1 → XP_046760113.1  forkhead box protein P4 isoform X4

  5. XM_015298986.4 → XP_015154472.2  forkhead box protein P4 isoform X5

    UniProtKB/TrEMBL
    A0A8V1ACS8
    Related
    ENSGALP00010041043.1, ENSGALT00010067139.1
    Conserved Domains (3) summary
    COG5025
    Location:329 → 592
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:262 → 329
    FOXP-CC; FOXP coiled-coil domain
    cd20067
    Location:424 → 510
    FH_FOXP4; Forkhead (FH) domain found in Forkhead box protein P4 (FOXP4) and similar proteins

  6. XM_046904158.1 → XP_046760114.1  forkhead box protein P4 isoform X7

  7. XM_046904153.1 → XP_046760109.1  forkhead box protein P4 isoform X1

    UniProtKB/TrEMBL
    A0A8V1AFE6

  8. XM_046904155.1 → XP_046760111.1  forkhead box protein P4 isoform X1

    UniProtKB/TrEMBL
    A0A8V1AFE6

  9. XM_040653034.2 → XP_040508968.1  forkhead box protein P4 isoform X1

    UniProtKB/TrEMBL
    A0A8V1AFE6
    Related
    ENSGALP00010041042.1, ENSGALT00010067138.1
    Conserved Domains (2) summary
    smart00339
    Location:454 → 526
    FH; FORKHEAD
    COG5025
    Location:359 → 622
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

  10. XM_040653035.2 → XP_040508969.1  forkhead box protein P4 isoform X6

    Conserved Domains (2) summary
    smart00339
    Location:387 → 459
    FH; FORKHEAD
    COG5025
    Location:292 → 555
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052598.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    4852644..4895217
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040691648.2 → XP_040547582.1  forkhead box protein P4 isoform X1

    UniProtKB/TrEMBL
    A0A8V1AFE6
    Conserved Domains (2) summary
    smart00339
    Location:454 → 526
    FH; FORKHEAD
    COG5025
    Location:359 → 622
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

  2. XM_046933081.1 → XP_046789037.1  forkhead box protein P4 isoform X3

  3. XM_040691650.2 → XP_040547584.1  forkhead box protein P4 isoform X2

    Conserved Domains (2) summary
    smart00339
    Location:453 → 525
    FH; FORKHEAD
    COG5025
    Location:358 → 621
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

  4. XM_046933082.1 → XP_046789038.1  forkhead box protein P4 isoform X4

  5. XM_040691651.2 → XP_040547585.1  forkhead box protein P4 isoform X5

    UniProtKB/TrEMBL
    A0A8V1ACS8
    Conserved Domains (3) summary
    COG5025
    Location:329 → 592
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:262 → 329
    FOXP-CC; FOXP coiled-coil domain
    cd20067
    Location:424 → 510
    FH_FOXP4; Forkhead (FH) domain found in Forkhead box protein P4 (FOXP4) and similar proteins

  6. XM_046933083.1 → XP_046789039.1  forkhead box protein P4 isoform X7

  7. XM_046933078.1 → XP_046789034.1  forkhead box protein P4 isoform X1

    UniProtKB/TrEMBL
    A0A8V1AFE6

  8. XM_046933079.1 → XP_046789035.1  forkhead box protein P4 isoform X1

    UniProtKB/TrEMBL
    A0A8V1AFE6

  9. XM_040691649.2 → XP_040547583.1  forkhead box protein P4 isoform X1

    UniProtKB/TrEMBL
    A0A8V1AFE6
    Conserved Domains (2) summary
    smart00339
    Location:454 → 526
    FH; FORKHEAD
    COG5025
    Location:359 → 622
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

  10. XM_040691652.2 → XP_040547586.1  forkhead box protein P4 isoform X6

    Conserved Domains (2) summary
    smart00339
    Location:387 → 459
    FH; FORKHEAD
    COG5025
    Location:292 → 555
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
Nucleotide Protein
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