U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TOE1 target of EGR1, exonuclease [ Canis lupus familiaris (dog) ]

Gene ID: 100856551, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Official Symbol
TOE1provided by VGNC
Official Full Name
target of EGR1, exonucleaseprovided by VGNC
Primary source
VGNC:VGNC:49627
See related
Ensembl:ENSCAFG00845023071
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See TOE1 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
8
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 15 NC_051819.1 (15170118..15173597, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 15 NC_006597.4 (15136140..15139619, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 15 NC_049236.1 (15107210..15110689, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 15 NC_049275.1 (14967231..14970707, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 15 NC_049756.1 (15035100..15038579, complement)

Chromosome 15 - NC_051819.1Genomic Context describing neighboring genes Neighboring gene testis associated actin remodelling kinase 2 Neighboring gene U4 spliceosomal RNA Neighboring gene uncharacterized LOC119868487 Neighboring gene mutY DNA glycosylase Neighboring gene 4-hydroxyphenylpyruvate dioxygenase like Neighboring gene creatine kinase B-type-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3'-5'-RNA exonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables snRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in snRNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Cajal body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
target of EGR1 protein 1
Names
target of EGR1, member 1 (nuclear)

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051819.1 Reference ROS_Cfam_1.0

    Range
    15170118..15173597 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038687855.1 → XP_038543783.1  target of EGR1 protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KWJ4, A0A8C0KYW0, A0A8C0NZ09, A0A8C0NZ60, A0A8I3PDS8
    Related
    ENSCAFP00845031905.1, ENSCAFT00845040755.1
    Conserved Domains (1) summary
    pfam04857
    Location:41 → 280
    CAF1; CAF1 family ribonuclease

  2. XM_038687857.1 → XP_038543785.1  target of EGR1 protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8I3PD10, A0A8P0PIZ8
    Related
    ENSCAFP00845031862.1, ENSCAFT00845040705.1
    Conserved Domains (1) summary
    pfam04857
    Location:51 → 276
    CAF1; CAF1 family ribonuclease

  3. XM_038687856.1 → XP_038543784.1  target of EGR1 protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0KWJ4, A0A8C0NZ60
    Conserved Domains (1) summary
    pfam04857
    Location:40 → 279
    CAF1; CAF1 family ribonuclease

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049275.1 Alternate UMICH_Zoey_3.1

    Range
    14967231..14970707 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038495857.1 → XP_038351785.1  target of EGR1 protein 1 isoform X1

    Conserved Domains (1) summary
    pfam04857
    Location:41 → 280
    CAF1; CAF1 family ribonuclease

  2. XM_038495858.1 → XP_038351786.1  target of EGR1 protein 1 isoform X3

    Conserved Domains (1) summary
    pfam04857
    Location:51 → 276
    CAF1; CAF1 family ribonuclease

  3. XM_038495856.1 → XP_038351784.1  target of EGR1 protein 1 isoform X4

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049756.1 Alternate UNSW_CanFamBas_1.0

    Range
    15035100..15038579 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038622114.1 → XP_038478042.1  target of EGR1 protein 1 isoform X1

    Conserved Domains (1) summary
    pfam04857
    Location:41 → 280
    CAF1; CAF1 family ribonuclease

  2. XM_038622116.1 → XP_038478044.1  target of EGR1 protein 1 isoform X3

    Conserved Domains (1) summary
    pfam04857
    Location:51 → 276
    CAF1; CAF1 family ribonuclease

  3. XM_038622115.1 → XP_038478043.1  target of EGR1 protein 1 isoform X2

    Conserved Domains (1) summary
    pfam04857
    Location:40 → 279
    CAF1; CAF1 family ribonuclease

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049236.1 Alternate UU_Cfam_GSD_1.0

    Range
    15107210..15110689 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038558234.1 → XP_038414162.1  target of EGR1 protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KWJ4, A0A8C0KYW0, A0A8C0NZ09, A0A8C0NZ60, A0A8I3PDS8
    Conserved Domains (1) summary
    pfam04857
    Location:41 → 280
    CAF1; CAF1 family ribonuclease

  2. XM_038558236.1 → XP_038414164.1  target of EGR1 protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8I3PD10, A0A8P0PIZ8
    Conserved Domains (1) summary
    pfam04857
    Location:51 → 276
    CAF1; CAF1 family ribonuclease

  3. XM_038558235.1 → XP_038414163.1  target of EGR1 protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0KWJ4, A0A8C0NZ60
    Conserved Domains (1) summary
    pfam04857
    Location:40 → 279
    CAF1; CAF1 family ribonuclease

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006597.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    15136140..15139619 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003639524.5 → XP_003639572.1  target of EGR1 protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KWJ4, A0A8C0KYW0, A0A8C0NZ09, A0A8C0NZ60, A0A8I3PDS8
    Conserved Domains (1) summary
    pfam04857
    Location:41 → 280
    CAF1; CAF1 family ribonuclease

  2. XM_022428020.2 → XP_022283728.1  target of EGR1 protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8I3PD10, A0A8P0PIZ8
    Conserved Domains (1) summary
    pfam04857
    Location:51 → 276
    CAF1; CAF1 family ribonuclease

  3. XM_022428017.2 → XP_022283725.1  target of EGR1 protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0KWJ4, A0A8C0NZ60
    Conserved Domains (1) summary
    pfam04857
    Location:40 → 279
    CAF1; CAF1 family ribonuclease
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Miscellaneous