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LOC100837963 transcription factor MYB57 [ Brachypodium distachyon (stiff brome) ]

Gene ID: 100837963, updated on 9-Nov-2023

Summary

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Gene symbol
LOC100837963
Gene description
transcription factor MYB57
Locus tag
BRADI_5g15246v3
Gene type
protein coding
RefSeq status
MODEL
Organism
Brachypodium distachyon
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
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Genomic context

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Location:
chromosome: 5
Exon count:
2
Annotation release Status Assembly Chr Location
103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 5 NC_016135.3 (18746390..18749557, complement)
102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 5 NC_016135.2 (18692763..18695898, complement)

Chromosome 5 - NC_016135.3Genomic Context describing neighboring genes Neighboring gene isocitrate dehydrogenase [NADP] Neighboring gene glutaredoxin-C6 Neighboring gene uncharacterized LOC100837354 Neighboring gene protein GPR107 Neighboring gene uncharacterized LOC100832718

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor MYB57

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Brachypodium_distachyon_v3.0 Primary Assembly

Genomic

  1. NC_016135.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Range
    18746390..18749557 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003581362.4 → XP_003581410.1  transcription factor MYB57

    UniProtKB/TrEMBL
    A0A0Q3KTE7
    Conserved Domains (2) summary
    smart00717
    Location:19 → 68
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
    pfam00249
    Location:19 → 66
    Myb_DNA-binding; Myb-like DNA-binding domain
Nucleotide Protein Strain
Heading Accession and Version

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