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LOC100830419 asparagine synthetase [glutamine-hydrolyzing] 2 [ Brachypodium distachyon (stiff brome) ]

Gene ID: 100830419, updated on 9-Nov-2023

Summary

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Gene symbol
LOC100830419
Gene description
asparagine synthetase [glutamine-hydrolyzing] 2
Locus tag
BRADI_2g21050v3
Gene type
protein coding
RefSeq status
MODEL
Organism
Brachypodium distachyon
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
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Genomic context

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See LOC100830419 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
15
Annotation release Status Assembly Chr Location
103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 2 NC_016132.3 (18403096..18409882)
102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 2 NC_016132.2 (18396274..18403037)

Chromosome 2 - NC_016132.3Genomic Context describing neighboring genes Neighboring gene ribosomal protein L11 methyltransferase Neighboring gene putative E3 ubiquitin-protein ligase RING1a Neighboring gene ethylene-responsive transcription factor 8 Neighboring gene ethylene-responsive transcription factor 12

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables asparagine synthase (glutamine-hydrolyzing) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in asparagine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
asparagine synthetase [glutamine-hydrolyzing] 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Brachypodium_distachyon_v3.0 Primary Assembly

Genomic

  1. NC_016132.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Range
    18403096..18409882
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014899265.2 → XP_014754751.2  asparagine synthetase [glutamine-hydrolyzing] 2 isoform X1

    UniProtKB/TrEMBL
    A0A2K2D9P1
    Conserved Domains (1) summary
    PLN02549
    Location:86 → 661
    PLN02549; asparagine synthase (glutamine-hydrolyzing)

  2. XM_003568136.4 → XP_003568184.1  asparagine synthetase [glutamine-hydrolyzing] 2 isoform X2

    UniProtKB/TrEMBL
    A0A2K2D9P4, I1HI18
    Conserved Domains (3) summary
    PLN02549
    Location:1 → 576
    PLN02549; asparagine synthase (glutamine-hydrolyzing)
    cd00712
    Location:2 → 192
    AsnB; Glutamine amidotransferases class-II (GATase) asparagine synthase_B type. Asparagine synthetase B catalyses the ATP-dependent conversion of aspartate to asparagine. This enzyme is a homodimer, with each monomer composed of a glutaminase domain and a ...
    pfam00733
    Location:210 → 511
    Asn_synthase; Asparagine synthase
Nucleotide Protein Strain
Heading Accession and Version

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