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LOC100826710 uncharacterized LOC100826710 [ Brachypodium distachyon (stiff brome) ]

Gene ID: 100826710, updated on 9-Nov-2023

Summary

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Gene symbol
LOC100826710
Gene description
uncharacterized LOC100826710
Locus tag
BRADI_4g03371v3
Gene type
protein coding
RefSeq status
MODEL
Organism
Brachypodium distachyon
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
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Genomic context

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Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 4 NC_016134.3 (2703898..2709861)
102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 4 NC_016134.2 (2705528..2706981)

Chromosome 4 - NC_016134.3Genomic Context describing neighboring genes Neighboring gene isoflavone 3'-hydroxylase Neighboring gene CSC1-like protein HYP1 Neighboring gene GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase Neighboring gene aspartic proteinase nepenthesin-1 Neighboring gene BTB/POZ domain-containing protein NPY4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC100826710

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Brachypodium_distachyon_v3.0 Primary Assembly

Genomic

  1. NC_016134.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Range
    2703898..2709861
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003579190.3 → XP_003579238.2  uncharacterized protein LOC100826710

    UniProtKB/TrEMBL
    A0A0Q3IIS6
    Conserved Domains (1) summary
    smart00380
    Location:66 → 122
    AP2; DNA-binding domain in plant proteins such as APETALA2 and EREBPs

  2. XM_024455278.1 → XP_024311046.1  uncharacterized protein LOC100826710

    UniProtKB/TrEMBL
    A0A0Q3IIS6
    Conserved Domains (1) summary
    smart00380
    Location:66 → 122
    AP2; DNA-binding domain in plant proteins such as APETALA2 and EREBPs
Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases